Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb1Q91Y08 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb1Q91Y08 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhb1Q91Y08 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb1Q91Y08 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb1Q91Y08 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb1Q91Y08 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhb1Q91Y08 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.66■■□□□ 1.22
Pcdhb1Q91Y08 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
Pcdhb1Q91Y08 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.66■■□□□ 1.22
Pcdhb1Q91Y08 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb1Q91Y08 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb1Q91Y08 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Pcdhb1Q91Y08 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb1Q91Y08 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb1Q91Y08 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb1Q91Y08 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb1Q91Y08 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb1Q91Y08 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb1Q91Y08 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhb1Q91Y08 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.64■■□□□ 1.22
Pcdhb1Q91Y08 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Pcdhb1Q91Y08 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhb1Q91Y08 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.64■■□□□ 1.21
Pcdhb1Q91Y08 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb1Q91Y08 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.63■■□□□ 1.21
Pcdhb1Q91Y08 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.63■■□□□ 1.21
Pcdhb1Q91Y08 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb1Q91Y08 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.62■■□□□ 1.21
Pcdhb1Q91Y08 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb1Q91Y08 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb1Q91Y08 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb1Q91Y08 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb1Q91Y08 Gm7332-201ENSMUST00000118351 454 ntBASIC22.61■■□□□ 1.21
Pcdhb1Q91Y08 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.61■■□□□ 1.21
Pcdhb1Q91Y08 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb1Q91Y08 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.61■■□□□ 1.21
Pcdhb1Q91Y08 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Pcdhb1Q91Y08 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.61■■□□□ 1.21
Pcdhb1Q91Y08 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb1Q91Y08 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb1Q91Y08 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Pcdhb1Q91Y08 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Pcdhb1Q91Y08 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb1Q91Y08 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb1Q91Y08 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Pcdhb1Q91Y08 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Pcdhb1Q91Y08 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb1Q91Y08 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb1Q91Y08 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb1Q91Y08 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb1Q91Y08 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb1Q91Y08 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb1Q91Y08 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb1Q91Y08 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhb1Q91Y08 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.58■■□□□ 1.21
Pcdhb1Q91Y08 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhb1Q91Y08 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhb1Q91Y08 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhb1Q91Y08 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhb1Q91Y08 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhb1Q91Y08 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhb1Q91Y08 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhb1Q91Y08 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhb1Q91Y08 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.57■■□□□ 1.2
Pcdhb1Q91Y08 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb1Q91Y08 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb1Q91Y08 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb1Q91Y08 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb1Q91Y08 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb1Q91Y08 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.57■■□□□ 1.2
Pcdhb1Q91Y08 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb1Q91Y08 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb1Q91Y08 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb1Q91Y08 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Pcdhb1Q91Y08 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb1Q91Y08 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.56■■□□□ 1.2
Pcdhb1Q91Y08 Gm12366-201ENSMUST00000121722 873 ntBASIC22.56■■□□□ 1.2
Pcdhb1Q91Y08 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.56■■□□□ 1.2
Pcdhb1Q91Y08 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.56■■□□□ 1.2
Pcdhb1Q91Y08 Gm5786-201ENSMUST00000085368 882 ntBASIC22.56■■□□□ 1.2
Pcdhb1Q91Y08 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb1Q91Y08 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb1Q91Y08 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb1Q91Y08 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Pcdhb1Q91Y08 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb1Q91Y08 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Pcdhb1Q91Y08 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb1Q91Y08 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.54■■□□□ 1.2
Pcdhb1Q91Y08 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb1Q91Y08 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb1Q91Y08 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb1Q91Y08 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb1Q91Y08 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb1Q91Y08 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb1Q91Y08 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb1Q91Y08 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb1Q91Y08 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb1Q91Y08 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb1Q91Y08 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms