Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gm10232-201ENSMUST00000089221 720 ntBASIC21.29■■□□□ 1
Cdhr1Q8VHP6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdhr1Q8VHP6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdhr1Q8VHP6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdhr1Q8VHP6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.28■■□□□ 1
Cdhr1Q8VHP6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdhr1Q8VHP6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cdhr1Q8VHP6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cdhr1Q8VHP6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdhr1Q8VHP6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdhr1Q8VHP6 Gm14117-201ENSMUST00000122417 843 ntBASIC21.28■■□□□ 1
Cdhr1Q8VHP6 Gm45102-201ENSMUST00000207427 857 ntBASIC21.28■■□□□ 1
Cdhr1Q8VHP6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdhr1Q8VHP6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdhr1Q8VHP6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cdhr1Q8VHP6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdhr1Q8VHP6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdhr1Q8VHP6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdhr1Q8VHP6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdhr1Q8VHP6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdhr1Q8VHP6 Gm9959-201ENSMUST00000068277 390 ntBASIC21.26■□□□□ 0.99
Cdhr1Q8VHP6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdhr1Q8VHP6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.25■□□□□ 0.99
Cdhr1Q8VHP6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.25■□□□□ 0.99
Cdhr1Q8VHP6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdhr1Q8VHP6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdhr1Q8VHP6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdhr1Q8VHP6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdhr1Q8VHP6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cdhr1Q8VHP6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdhr1Q8VHP6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdhr1Q8VHP6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdhr1Q8VHP6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cdhr1Q8VHP6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cdhr1Q8VHP6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdhr1Q8VHP6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdhr1Q8VHP6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cdhr1Q8VHP6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdhr1Q8VHP6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdhr1Q8VHP6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdhr1Q8VHP6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdhr1Q8VHP6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Cdhr1Q8VHP6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cdhr1Q8VHP6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdhr1Q8VHP6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdhr1Q8VHP6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cdhr1Q8VHP6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdhr1Q8VHP6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cdhr1Q8VHP6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdhr1Q8VHP6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdhr1Q8VHP6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdhr1Q8VHP6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.2■□□□□ 0.98
Cdhr1Q8VHP6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdhr1Q8VHP6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdhr1Q8VHP6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cdhr1Q8VHP6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdhr1Q8VHP6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.19■□□□□ 0.98
Cdhr1Q8VHP6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdhr1Q8VHP6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.18■□□□□ 0.98
Cdhr1Q8VHP6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdhr1Q8VHP6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdhr1Q8VHP6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdhr1Q8VHP6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cdhr1Q8VHP6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdhr1Q8VHP6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cdhr1Q8VHP6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdhr1Q8VHP6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdhr1Q8VHP6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdhr1Q8VHP6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cdhr1Q8VHP6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdhr1Q8VHP6 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.16■□□□□ 0.98
Cdhr1Q8VHP6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Cdhr1Q8VHP6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.15■□□□□ 0.98
Cdhr1Q8VHP6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdhr1Q8VHP6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdhr1Q8VHP6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdhr1Q8VHP6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.15■□□□□ 0.98
Cdhr1Q8VHP6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdhr1Q8VHP6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Cdhr1Q8VHP6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdhr1Q8VHP6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdhr1Q8VHP6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdhr1Q8VHP6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.14■□□□□ 0.97
Cdhr1Q8VHP6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.14■□□□□ 0.97
Cdhr1Q8VHP6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.14■□□□□ 0.97
Cdhr1Q8VHP6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cdhr1Q8VHP6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdhr1Q8VHP6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdhr1Q8VHP6 Etf1-202ENSMUST00000180351 108 ntBASIC21.13■□□□□ 0.97
Cdhr1Q8VHP6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdhr1Q8VHP6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdhr1Q8VHP6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdhr1Q8VHP6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cdhr1Q8VHP6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdhr1Q8VHP6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdhr1Q8VHP6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.12■□□□□ 0.97
Cdhr1Q8VHP6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdhr1Q8VHP6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdhr1Q8VHP6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdhr1Q8VHP6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms