Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retreg1dQ8VE91 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retreg1dQ8VE91 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Retreg1dQ8VE91 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retreg1dQ8VE91 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retreg1dQ8VE91 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Retreg1dQ8VE91 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retreg1dQ8VE91 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retreg1dQ8VE91 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retreg1dQ8VE91 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Retreg1dQ8VE91 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Retreg1dQ8VE91 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Retreg1dQ8VE91 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retreg1dQ8VE91 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Retreg1dQ8VE91 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.38■■□□□ 1.01
Retreg1dQ8VE91 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.38■■□□□ 1.01
Retreg1dQ8VE91 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.38■■□□□ 1.01
Retreg1dQ8VE91 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retreg1dQ8VE91 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Retreg1dQ8VE91 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retreg1dQ8VE91 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retreg1dQ8VE91 Gm13238-201ENSMUST00000117655 780 ntBASIC21.37■■□□□ 1.01
Retreg1dQ8VE91 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retreg1dQ8VE91 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retreg1dQ8VE91 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retreg1dQ8VE91 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retreg1dQ8VE91 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retreg1dQ8VE91 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retreg1dQ8VE91 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Retreg1dQ8VE91 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retreg1dQ8VE91 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Retreg1dQ8VE91 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retreg1dQ8VE91 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retreg1dQ8VE91 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retreg1dQ8VE91 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Retreg1dQ8VE91 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Retreg1dQ8VE91 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Retreg1dQ8VE91 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retreg1dQ8VE91 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retreg1dQ8VE91 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retreg1dQ8VE91 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retreg1dQ8VE91 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retreg1dQ8VE91 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retreg1dQ8VE91 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retreg1dQ8VE91 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retreg1dQ8VE91 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.33■■□□□ 1.01
Retreg1dQ8VE91 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retreg1dQ8VE91 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Retreg1dQ8VE91 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retreg1dQ8VE91 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.32■■□□□ 1
Retreg1dQ8VE91 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retreg1dQ8VE91 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Retreg1dQ8VE91 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.31■■□□□ 1
Retreg1dQ8VE91 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retreg1dQ8VE91 Gm15546-201ENSMUST00000122095 826 ntBASIC21.31■■□□□ 1
Retreg1dQ8VE91 Gm45444-201ENSMUST00000211394 898 ntBASIC21.31■■□□□ 1
Retreg1dQ8VE91 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Retreg1dQ8VE91 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Retreg1dQ8VE91 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Retreg1dQ8VE91 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.3■■□□□ 1
Retreg1dQ8VE91 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retreg1dQ8VE91 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.3■■□□□ 1
Retreg1dQ8VE91 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retreg1dQ8VE91 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.3■■□□□ 1
Retreg1dQ8VE91 Gm43566-201ENSMUST00000196851 808 ntBASIC21.3■■□□□ 1
Retreg1dQ8VE91 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.3■■□□□ 1
Retreg1dQ8VE91 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retreg1dQ8VE91 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retreg1dQ8VE91 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retreg1dQ8VE91 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Retreg1dQ8VE91 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retreg1dQ8VE91 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retreg1dQ8VE91 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retreg1dQ8VE91 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retreg1dQ8VE91 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retreg1dQ8VE91 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.29■■□□□ 1
Retreg1dQ8VE91 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Retreg1dQ8VE91 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retreg1dQ8VE91 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Retreg1dQ8VE91 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retreg1dQ8VE91 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.28■■□□□ 1
Retreg1dQ8VE91 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.28■■□□□ 1
Retreg1dQ8VE91 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Retreg1dQ8VE91 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retreg1dQ8VE91 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retreg1dQ8VE91 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Retreg1dQ8VE91 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retreg1dQ8VE91 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retreg1dQ8VE91 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Retreg1dQ8VE91 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retreg1dQ8VE91 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Retreg1dQ8VE91 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retreg1dQ8VE91 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Retreg1dQ8VE91 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Retreg1dQ8VE91 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retreg1dQ8VE91 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Retreg1dQ8VE91 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Retreg1dQ8VE91 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retreg1dQ8VE91 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.26■□□□□ 0.99
Retreg1dQ8VE91 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms