Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps39Q8R5L3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps39Q8R5L3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps39Q8R5L3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Vps39Q8R5L3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps39Q8R5L3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.75■■□□□ 1.07
Vps39Q8R5L3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps39Q8R5L3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vps39Q8R5L3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps39Q8R5L3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps39Q8R5L3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps39Q8R5L3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps39Q8R5L3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps39Q8R5L3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps39Q8R5L3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps39Q8R5L3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps39Q8R5L3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps39Q8R5L3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps39Q8R5L3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.74■■□□□ 1.07
Vps39Q8R5L3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.74■■□□□ 1.07
Vps39Q8R5L3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps39Q8R5L3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps39Q8R5L3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.73■■□□□ 1.07
Vps39Q8R5L3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vps39Q8R5L3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps39Q8R5L3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Vps39Q8R5L3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps39Q8R5L3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps39Q8R5L3 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.72■■□□□ 1.07
Vps39Q8R5L3 Gm16437-201ENSMUST00000025669 507 ntBASIC21.72■■□□□ 1.07
Vps39Q8R5L3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps39Q8R5L3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps39Q8R5L3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.71■■□□□ 1.07
Vps39Q8R5L3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps39Q8R5L3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Vps39Q8R5L3 Gm11687-201ENSMUST00000118911 886 ntBASIC21.7■■□□□ 1.06
Vps39Q8R5L3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.7■■□□□ 1.06
Vps39Q8R5L3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vps39Q8R5L3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps39Q8R5L3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Vps39Q8R5L3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps39Q8R5L3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps39Q8R5L3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Vps39Q8R5L3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps39Q8R5L3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Vps39Q8R5L3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.69■■□□□ 1.06
Vps39Q8R5L3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps39Q8R5L3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Vps39Q8R5L3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps39Q8R5L3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps39Q8R5L3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.68■■□□□ 1.06
Vps39Q8R5L3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Vps39Q8R5L3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Vps39Q8R5L3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps39Q8R5L3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps39Q8R5L3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps39Q8R5L3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps39Q8R5L3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps39Q8R5L3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.67■■□□□ 1.06
Vps39Q8R5L3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Vps39Q8R5L3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps39Q8R5L3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vps39Q8R5L3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps39Q8R5L3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Vps39Q8R5L3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps39Q8R5L3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps39Q8R5L3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vps39Q8R5L3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps39Q8R5L3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps39Q8R5L3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps39Q8R5L3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Vps39Q8R5L3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps39Q8R5L3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Vps39Q8R5L3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vps39Q8R5L3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps39Q8R5L3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps39Q8R5L3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps39Q8R5L3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.64■■□□□ 1.05
Vps39Q8R5L3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Vps39Q8R5L3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps39Q8R5L3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps39Q8R5L3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps39Q8R5L3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps39Q8R5L3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps39Q8R5L3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Vps39Q8R5L3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps39Q8R5L3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Vps39Q8R5L3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps39Q8R5L3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.62■■□□□ 1.05
Vps39Q8R5L3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps39Q8R5L3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Vps39Q8R5L3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps39Q8R5L3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.6■■□□□ 1.05
Vps39Q8R5L3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps39Q8R5L3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.6■■□□□ 1.05
Vps39Q8R5L3 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.6■■□□□ 1.05
Vps39Q8R5L3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.59■■□□□ 1.05
Vps39Q8R5L3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps39Q8R5L3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps39Q8R5L3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms