Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Alms1Q8K4E0 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.55■■□□□ 1.04
Alms1Q8K4E0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Alms1Q8K4E0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alms1Q8K4E0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alms1Q8K4E0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alms1Q8K4E0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alms1Q8K4E0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.54■■□□□ 1.04
Alms1Q8K4E0 Gm13241-201ENSMUST00000094493 780 ntBASIC21.54■■□□□ 1.04
Alms1Q8K4E0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alms1Q8K4E0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Alms1Q8K4E0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Alms1Q8K4E0 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.53■■□□□ 1.04
Alms1Q8K4E0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.53■■□□□ 1.04
Alms1Q8K4E0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Alms1Q8K4E0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Alms1Q8K4E0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.52■■□□□ 1.04
Alms1Q8K4E0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Alms1Q8K4E0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alms1Q8K4E0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alms1Q8K4E0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alms1Q8K4E0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alms1Q8K4E0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alms1Q8K4E0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Alms1Q8K4E0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.5■■□□□ 1.03
Alms1Q8K4E0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.5■■□□□ 1.03
Alms1Q8K4E0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Alms1Q8K4E0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alms1Q8K4E0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alms1Q8K4E0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alms1Q8K4E0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alms1Q8K4E0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Alms1Q8K4E0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alms1Q8K4E0 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.49■■□□□ 1.03
Alms1Q8K4E0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Alms1Q8K4E0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.48■■□□□ 1.03
Alms1Q8K4E0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.48■■□□□ 1.03
Alms1Q8K4E0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Alms1Q8K4E0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Alms1Q8K4E0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Alms1Q8K4E0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Alms1Q8K4E0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Alms1Q8K4E0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.47■■□□□ 1.03
Alms1Q8K4E0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Alms1Q8K4E0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Alms1Q8K4E0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Alms1Q8K4E0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Alms1Q8K4E0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.46■■□□□ 1.03
Alms1Q8K4E0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Alms1Q8K4E0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Alms1Q8K4E0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.45■■□□□ 1.02
Alms1Q8K4E0 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.45■■□□□ 1.02
Alms1Q8K4E0 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.45■■□□□ 1.02
Alms1Q8K4E0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Alms1Q8K4E0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Alms1Q8K4E0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alms1Q8K4E0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alms1Q8K4E0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Alms1Q8K4E0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Alms1Q8K4E0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.44■■□□□ 1.02
Alms1Q8K4E0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Alms1Q8K4E0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Alms1Q8K4E0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Alms1Q8K4E0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Alms1Q8K4E0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Alms1Q8K4E0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.43■■□□□ 1.02
Alms1Q8K4E0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.43■■□□□ 1.02
Alms1Q8K4E0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Alms1Q8K4E0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Alms1Q8K4E0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Alms1Q8K4E0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
Alms1Q8K4E0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Alms1Q8K4E0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Alms1Q8K4E0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Alms1Q8K4E0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Alms1Q8K4E0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Alms1Q8K4E0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.4■■□□□ 1.02
Alms1Q8K4E0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.4■■□□□ 1.02
Alms1Q8K4E0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alms1Q8K4E0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Alms1Q8K4E0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.4■■□□□ 1.02
Alms1Q8K4E0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.4■■□□□ 1.02
Alms1Q8K4E0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alms1Q8K4E0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alms1Q8K4E0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alms1Q8K4E0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alms1Q8K4E0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Alms1Q8K4E0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.39■■□□□ 1.02
Alms1Q8K4E0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Alms1Q8K4E0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Alms1Q8K4E0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Alms1Q8K4E0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Alms1Q8K4E0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Alms1Q8K4E0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Alms1Q8K4E0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Alms1Q8K4E0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.38■■□□□ 1.01
Alms1Q8K4E0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Alms1Q8K4E0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Alms1Q8K4E0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Alms1Q8K4E0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms