Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Golgb1-201ENSMUST00000023534 498 ntBASIC21.84■■□□□ 1.09
Zc3h3Q8CHP0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Zc3h3Q8CHP0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Zc3h3Q8CHP0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Zc3h3Q8CHP0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Zc3h3Q8CHP0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.83■■□□□ 1.09
Zc3h3Q8CHP0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Zc3h3Q8CHP0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Zc3h3Q8CHP0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Zc3h3Q8CHP0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.82■■□□□ 1.08
Zc3h3Q8CHP0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
Zc3h3Q8CHP0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
Zc3h3Q8CHP0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Zc3h3Q8CHP0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Zc3h3Q8CHP0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Zc3h3Q8CHP0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Zc3h3Q8CHP0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.81■■□□□ 1.08
Zc3h3Q8CHP0 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.81■■□□□ 1.08
Zc3h3Q8CHP0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Zc3h3Q8CHP0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Zc3h3Q8CHP0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Zc3h3Q8CHP0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Zc3h3Q8CHP0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Zc3h3Q8CHP0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
Zc3h3Q8CHP0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.79■■□□□ 1.08
Zc3h3Q8CHP0 Gm10399-202ENSMUST00000202768 748 ntBASIC21.79■■□□□ 1.08
Zc3h3Q8CHP0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Zc3h3Q8CHP0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Zc3h3Q8CHP0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Zc3h3Q8CHP0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Zc3h3Q8CHP0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Zc3h3Q8CHP0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Zc3h3Q8CHP0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Zc3h3Q8CHP0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Zc3h3Q8CHP0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Zc3h3Q8CHP0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zc3h3Q8CHP0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.77■■□□□ 1.08
Zc3h3Q8CHP0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Zc3h3Q8CHP0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.77■■□□□ 1.08
Zc3h3Q8CHP0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.77■■□□□ 1.08
Zc3h3Q8CHP0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.77■■□□□ 1.08
Zc3h3Q8CHP0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.77■■□□□ 1.08
Zc3h3Q8CHP0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Zc3h3Q8CHP0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Zc3h3Q8CHP0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h3Q8CHP0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Zc3h3Q8CHP0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Zc3h3Q8CHP0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h3Q8CHP0 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.75■■□□□ 1.07
Zc3h3Q8CHP0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.75■■□□□ 1.07
Zc3h3Q8CHP0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h3Q8CHP0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.75■■□□□ 1.07
Zc3h3Q8CHP0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
Zc3h3Q8CHP0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h3Q8CHP0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
Zc3h3Q8CHP0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.75■■□□□ 1.07
Zc3h3Q8CHP0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h3Q8CHP0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h3Q8CHP0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h3Q8CHP0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.74■■□□□ 1.07
Zc3h3Q8CHP0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h3Q8CHP0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h3Q8CHP0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.73■■□□□ 1.07
Zc3h3Q8CHP0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.73■■□□□ 1.07
Zc3h3Q8CHP0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.73■■□□□ 1.07
Zc3h3Q8CHP0 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.73■■□□□ 1.07
Zc3h3Q8CHP0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h3Q8CHP0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.73■■□□□ 1.07
Zc3h3Q8CHP0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h3Q8CHP0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.73■■□□□ 1.07
Zc3h3Q8CHP0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h3Q8CHP0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h3Q8CHP0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h3Q8CHP0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h3Q8CHP0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h3Q8CHP0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h3Q8CHP0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
Zc3h3Q8CHP0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
Zc3h3Q8CHP0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h3Q8CHP0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.71■■□□□ 1.07
Zc3h3Q8CHP0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.71■■□□□ 1.07
Zc3h3Q8CHP0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Zc3h3Q8CHP0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zc3h3Q8CHP0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.7■■□□□ 1.06
Zc3h3Q8CHP0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Zc3h3Q8CHP0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Zc3h3Q8CHP0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zc3h3Q8CHP0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h3Q8CHP0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
Zc3h3Q8CHP0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h3Q8CHP0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h3Q8CHP0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h3Q8CHP0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h3Q8CHP0 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.68■■□□□ 1.06
Zc3h3Q8CHP0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Zc3h3Q8CHP0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3h3Q8CHP0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.68■■□□□ 1.06
Zc3h3Q8CHP0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.67■■□□□ 1.06
Zc3h3Q8CHP0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.67■■□□□ 1.06
Zc3h3Q8CHP0 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms