Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ptcd1Q8C2E4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ptcd1Q8C2E4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC27■■□□□ 1.91
Ptcd1Q8C2E4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC27■■□□□ 1.91
Ptcd1Q8C2E4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC27■■□□□ 1.91
Ptcd1Q8C2E4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC27■■□□□ 1.91
Ptcd1Q8C2E4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC27■■□□□ 1.91
Ptcd1Q8C2E4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC27■■□□□ 1.91
Ptcd1Q8C2E4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Ptcd1Q8C2E4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ptcd1Q8C2E4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ptcd1Q8C2E4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ptcd1Q8C2E4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ptcd1Q8C2E4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.98■■□□□ 1.91
Ptcd1Q8C2E4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC26.98■■□□□ 1.91
Ptcd1Q8C2E4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Ptcd1Q8C2E4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ptcd1Q8C2E4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ptcd1Q8C2E4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ptcd1Q8C2E4 Gm21956-201ENSMUST00000179946 522 ntBASIC26.97■■□□□ 1.91
Ptcd1Q8C2E4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC26.97■■□□□ 1.91
Ptcd1Q8C2E4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC26.97■■□□□ 1.91
Ptcd1Q8C2E4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ptcd1Q8C2E4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.97■■□□□ 1.91
Ptcd1Q8C2E4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ptcd1Q8C2E4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC26.96■■□□□ 1.91
Ptcd1Q8C2E4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ptcd1Q8C2E4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ptcd1Q8C2E4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Ptcd1Q8C2E4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ptcd1Q8C2E4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Ptcd1Q8C2E4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
Ptcd1Q8C2E4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ptcd1Q8C2E4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ptcd1Q8C2E4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ptcd1Q8C2E4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ptcd1Q8C2E4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Ptcd1Q8C2E4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ptcd1Q8C2E4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ptcd1Q8C2E4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ptcd1Q8C2E4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC26.93■■□□□ 1.9
Ptcd1Q8C2E4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ptcd1Q8C2E4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ptcd1Q8C2E4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Ptcd1Q8C2E4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ptcd1Q8C2E4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ptcd1Q8C2E4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
Ptcd1Q8C2E4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ptcd1Q8C2E4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC26.91■■□□□ 1.9
Ptcd1Q8C2E4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.91■■□□□ 1.9
Ptcd1Q8C2E4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ptcd1Q8C2E4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ptcd1Q8C2E4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ptcd1Q8C2E4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Ptcd1Q8C2E4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.9■■□□□ 1.9
Ptcd1Q8C2E4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ptcd1Q8C2E4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Ptcd1Q8C2E4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ptcd1Q8C2E4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ptcd1Q8C2E4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ptcd1Q8C2E4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC26.89■■□□□ 1.9
Ptcd1Q8C2E4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC26.89■■□□□ 1.9
Ptcd1Q8C2E4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ptcd1Q8C2E4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ptcd1Q8C2E4 Gm22238-201ENSMUST00000175222 88 ntBASIC26.88■■□□□ 1.89
Ptcd1Q8C2E4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ptcd1Q8C2E4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.87■■□□□ 1.89
Ptcd1Q8C2E4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ptcd1Q8C2E4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ptcd1Q8C2E4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ptcd1Q8C2E4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ptcd1Q8C2E4 Gm5297-201ENSMUST00000198555 1171 ntBASIC26.87■■□□□ 1.89
Ptcd1Q8C2E4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC26.87■■□□□ 1.89
Ptcd1Q8C2E4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ptcd1Q8C2E4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Ptcd1Q8C2E4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Ptcd1Q8C2E4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Ptcd1Q8C2E4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ptcd1Q8C2E4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC26.85■■□□□ 1.89
Ptcd1Q8C2E4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC26.85■■□□□ 1.89
Ptcd1Q8C2E4 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.85■■□□□ 1.89
Ptcd1Q8C2E4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ptcd1Q8C2E4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ptcd1Q8C2E4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ptcd1Q8C2E4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ptcd1Q8C2E4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ptcd1Q8C2E4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Ptcd1Q8C2E4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ptcd1Q8C2E4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ptcd1Q8C2E4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC26.83■■□□□ 1.89
Ptcd1Q8C2E4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ptcd1Q8C2E4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Ptcd1Q8C2E4 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.82■■□□□ 1.88
Ptcd1Q8C2E4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ptcd1Q8C2E4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ptcd1Q8C2E4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.81■■□□□ 1.88
Ptcd1Q8C2E4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ptcd1Q8C2E4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC26.8■■□□□ 1.88
Ptcd1Q8C2E4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ptcd1Q8C2E4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms