Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sh3rf3Q8C120 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.68■■□□□ 1.22
Sh3rf3Q8C120 Gm14523-201ENSMUST00000117260 558 ntBASIC22.68■■□□□ 1.22
Sh3rf3Q8C120 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.68■■□□□ 1.22
Sh3rf3Q8C120 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.68■■□□□ 1.22
Sh3rf3Q8C120 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sh3rf3Q8C120 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.68■■□□□ 1.22
Sh3rf3Q8C120 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Sh3rf3Q8C120 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sh3rf3Q8C120 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Sh3rf3Q8C120 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sh3rf3Q8C120 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Sh3rf3Q8C120 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.66■■□□□ 1.22
Sh3rf3Q8C120 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.66■■□□□ 1.22
Sh3rf3Q8C120 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3rf3Q8C120 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3rf3Q8C120 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3rf3Q8C120 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Gm12366-201ENSMUST00000121722 873 ntBASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Gm5786-201ENSMUST00000085368 882 ntBASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3rf3Q8C120 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Sh3rf3Q8C120 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3rf3Q8C120 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3rf3Q8C120 Gm7332-201ENSMUST00000118351 454 ntBASIC22.63■■□□□ 1.21
Sh3rf3Q8C120 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3rf3Q8C120 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.63■■□□□ 1.21
Sh3rf3Q8C120 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3rf3Q8C120 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3rf3Q8C120 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3rf3Q8C120 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3rf3Q8C120 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3rf3Q8C120 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3rf3Q8C120 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3rf3Q8C120 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3rf3Q8C120 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3rf3Q8C120 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3rf3Q8C120 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.6■■□□□ 1.21
Sh3rf3Q8C120 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3rf3Q8C120 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3rf3Q8C120 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3rf3Q8C120 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3rf3Q8C120 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.59■■□□□ 1.21
Sh3rf3Q8C120 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3rf3Q8C120 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3rf3Q8C120 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3rf3Q8C120 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sh3rf3Q8C120 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Sh3rf3Q8C120 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Sh3rf3Q8C120 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sh3rf3Q8C120 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3rf3Q8C120 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3rf3Q8C120 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.57■■□□□ 1.2
Sh3rf3Q8C120 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3rf3Q8C120 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3rf3Q8C120 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.56■■□□□ 1.2
Sh3rf3Q8C120 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Sh3rf3Q8C120 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3rf3Q8C120 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3rf3Q8C120 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.56■■□□□ 1.2
Sh3rf3Q8C120 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.55■■□□□ 1.2
Sh3rf3Q8C120 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.55■■□□□ 1.2
Sh3rf3Q8C120 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
Sh3rf3Q8C120 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf3Q8C120 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf3Q8C120 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.54■■□□□ 1.2
Sh3rf3Q8C120 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf3Q8C120 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf3Q8C120 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf3Q8C120 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf3Q8C120 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf3Q8C120 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf3Q8C120 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf3Q8C120 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3rf3Q8C120 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3rf3Q8C120 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3rf3Q8C120 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3rf3Q8C120 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms