Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrtm1Q8BXQ3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lrtm1Q8BXQ3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lrtm1Q8BXQ3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrtm1Q8BXQ3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lrtm1Q8BXQ3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.04■□□□□ 0.64
Lrtm1Q8BXQ3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrtm1Q8BXQ3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrtm1Q8BXQ3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrtm1Q8BXQ3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lrtm1Q8BXQ3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrtm1Q8BXQ3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrtm1Q8BXQ3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrtm1Q8BXQ3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Lrtm1Q8BXQ3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrtm1Q8BXQ3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrtm1Q8BXQ3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrtm1Q8BXQ3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Lrtm1Q8BXQ3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrtm1Q8BXQ3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrtm1Q8BXQ3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrtm1Q8BXQ3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrtm1Q8BXQ3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Lrtm1Q8BXQ3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Lrtm1Q8BXQ3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrtm1Q8BXQ3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrtm1Q8BXQ3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrtm1Q8BXQ3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrtm1Q8BXQ3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.01■□□□□ 0.63
Lrtm1Q8BXQ3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Lrtm1Q8BXQ3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lrtm1Q8BXQ3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrtm1Q8BXQ3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrtm1Q8BXQ3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrtm1Q8BXQ3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lrtm1Q8BXQ3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Lrtm1Q8BXQ3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Lrtm1Q8BXQ3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lrtm1Q8BXQ3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrtm1Q8BXQ3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lrtm1Q8BXQ3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lrtm1Q8BXQ3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.98■□□□□ 0.63
Lrtm1Q8BXQ3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lrtm1Q8BXQ3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lrtm1Q8BXQ3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.98■□□□□ 0.63
Lrtm1Q8BXQ3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lrtm1Q8BXQ3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lrtm1Q8BXQ3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lrtm1Q8BXQ3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lrtm1Q8BXQ3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lrtm1Q8BXQ3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Lrtm1Q8BXQ3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.97■□□□□ 0.63
Lrtm1Q8BXQ3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Lrtm1Q8BXQ3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrtm1Q8BXQ3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrtm1Q8BXQ3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrtm1Q8BXQ3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.97■□□□□ 0.63
Lrtm1Q8BXQ3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrtm1Q8BXQ3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.96■□□□□ 0.63
Lrtm1Q8BXQ3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrtm1Q8BXQ3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrtm1Q8BXQ3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrtm1Q8BXQ3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrtm1Q8BXQ3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrtm1Q8BXQ3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lrtm1Q8BXQ3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrtm1Q8BXQ3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrtm1Q8BXQ3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrtm1Q8BXQ3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.95■□□□□ 0.62
Lrtm1Q8BXQ3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.95■□□□□ 0.62
Lrtm1Q8BXQ3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lrtm1Q8BXQ3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.95■□□□□ 0.62
Lrtm1Q8BXQ3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lrtm1Q8BXQ3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrtm1Q8BXQ3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrtm1Q8BXQ3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.94■□□□□ 0.62
Lrtm1Q8BXQ3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Lrtm1Q8BXQ3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrtm1Q8BXQ3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrtm1Q8BXQ3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrtm1Q8BXQ3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Lrtm1Q8BXQ3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrtm1Q8BXQ3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrtm1Q8BXQ3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrtm1Q8BXQ3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrtm1Q8BXQ3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrtm1Q8BXQ3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lrtm1Q8BXQ3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrtm1Q8BXQ3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.92■□□□□ 0.62
Lrtm1Q8BXQ3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrtm1Q8BXQ3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrtm1Q8BXQ3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lrtm1Q8BXQ3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrtm1Q8BXQ3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrtm1Q8BXQ3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lrtm1Q8BXQ3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrtm1Q8BXQ3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lrtm1Q8BXQ3 Gm13238-201ENSMUST00000117655 780 ntBASIC18.9■□□□□ 0.62
Lrtm1Q8BXQ3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lrtm1Q8BXQ3 Gm22567-201ENSMUST00000175542 342 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms