Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
Usp54Q8BL06 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
Usp54Q8BL06 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Usp54Q8BL06 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC31.99■■■□□ 2.71
Usp54Q8BL06 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Usp54Q8BL06 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Usp54Q8BL06 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC31.98■■■□□ 2.71
Usp54Q8BL06 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Usp54Q8BL06 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Usp54Q8BL06 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Usp54Q8BL06 Gm22238-201ENSMUST00000175222 88 ntBASIC31.98■■■□□ 2.71
Usp54Q8BL06 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Usp54Q8BL06 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Usp54Q8BL06 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Usp54Q8BL06 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Usp54Q8BL06 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Usp54Q8BL06 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
Usp54Q8BL06 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Usp54Q8BL06 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Usp54Q8BL06 Gm7417-201ENSMUST00000192950 473 ntBASIC31.95■■■□□ 2.71
Usp54Q8BL06 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC31.95■■■□□ 2.71
Usp54Q8BL06 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC31.95■■■□□ 2.71
Usp54Q8BL06 Gm40881-201ENSMUST00000223397 166 ntBASIC31.94■■■□□ 2.7
Usp54Q8BL06 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Usp54Q8BL06 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC31.94■■■□□ 2.7
Usp54Q8BL06 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Usp54Q8BL06 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Usp54Q8BL06 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Usp54Q8BL06 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Usp54Q8BL06 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Usp54Q8BL06 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Usp54Q8BL06 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Usp54Q8BL06 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
Usp54Q8BL06 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Usp54Q8BL06 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
Usp54Q8BL06 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Usp54Q8BL06 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC31.9■■■□□ 2.7
Usp54Q8BL06 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC31.9■■■□□ 2.7
Usp54Q8BL06 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Usp54Q8BL06 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Usp54Q8BL06 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Usp54Q8BL06 Gm13241-201ENSMUST00000094493 780 ntBASIC31.89■■■□□ 2.7
Usp54Q8BL06 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Usp54Q8BL06 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
Usp54Q8BL06 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Usp54Q8BL06 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Usp54Q8BL06 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Usp54Q8BL06 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Usp54Q8BL06 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC31.87■■■□□ 2.69
Usp54Q8BL06 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC31.87■■■□□ 2.69
Usp54Q8BL06 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
Usp54Q8BL06 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Usp54Q8BL06 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Usp54Q8BL06 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Usp54Q8BL06 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Usp54Q8BL06 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Usp54Q8BL06 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Usp54Q8BL06 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Usp54Q8BL06 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC31.84■■■□□ 2.69
Usp54Q8BL06 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Usp54Q8BL06 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC31.84■■■□□ 2.69
Usp54Q8BL06 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Usp54Q8BL06 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC31.83■■■□□ 2.69
Usp54Q8BL06 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Usp54Q8BL06 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Usp54Q8BL06 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Usp54Q8BL06 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Usp54Q8BL06 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Usp54Q8BL06 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Usp54Q8BL06 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Usp54Q8BL06 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Usp54Q8BL06 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Usp54Q8BL06 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Usp54Q8BL06 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Usp54Q8BL06 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Usp54Q8BL06 Gm11847-201ENSMUST00000125165 1119 ntBASIC31.78■■■□□ 2.68
Usp54Q8BL06 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC31.78■■■□□ 2.68
Usp54Q8BL06 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC31.78■■■□□ 2.68
Usp54Q8BL06 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Usp54Q8BL06 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Usp54Q8BL06 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Usp54Q8BL06 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Usp54Q8BL06 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
Usp54Q8BL06 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Usp54Q8BL06 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
Usp54Q8BL06 Gm42699-201ENSMUST00000198104 1657 ntBASIC31.75■■■□□ 2.67
Usp54Q8BL06 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Usp54Q8BL06 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Usp54Q8BL06 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Usp54Q8BL06 Gm9847-201ENSMUST00000052528 599 ntBASIC31.74■■■□□ 2.67
Usp54Q8BL06 Gm8093-201ENSMUST00000128935 1892 ntBASIC31.74■■■□□ 2.67
Usp54Q8BL06 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC31.74■■■□□ 2.67
Usp54Q8BL06 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Usp54Q8BL06 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
Usp54Q8BL06 Gm43034-201ENSMUST00000198678 1364 ntBASIC31.73■■■□□ 2.67
Usp54Q8BL06 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
Usp54Q8BL06 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Usp54Q8BL06 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC31.73■■■□□ 2.67
Usp54Q8BL06 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Usp54Q8BL06 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms