Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Srrm3Q80WV7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Srrm3Q80WV7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Srrm3Q80WV7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Srrm3Q80WV7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Srrm3Q80WV7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.58■■□□□ 1.21
Srrm3Q80WV7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.58■■□□□ 1.21
Srrm3Q80WV7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Srrm3Q80WV7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Srrm3Q80WV7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Srrm3Q80WV7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.57■■□□□ 1.2
Srrm3Q80WV7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Srrm3Q80WV7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Srrm3Q80WV7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Srrm3Q80WV7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Srrm3Q80WV7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Srrm3Q80WV7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Srrm3Q80WV7 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.56■■□□□ 1.2
Srrm3Q80WV7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.56■■□□□ 1.2
Srrm3Q80WV7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
Srrm3Q80WV7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Srrm3Q80WV7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Srrm3Q80WV7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Srrm3Q80WV7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Srrm3Q80WV7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Srrm3Q80WV7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.55■■□□□ 1.2
Srrm3Q80WV7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Srrm3Q80WV7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Srrm3Q80WV7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Srrm3Q80WV7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Srrm3Q80WV7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.54■■□□□ 1.2
Srrm3Q80WV7 Gm22567-201ENSMUST00000175542 342 ntBASIC22.54■■□□□ 1.2
Srrm3Q80WV7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Srrm3Q80WV7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Srrm3Q80WV7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Srrm3Q80WV7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Srrm3Q80WV7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Srrm3Q80WV7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Srrm3Q80WV7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Srrm3Q80WV7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Srrm3Q80WV7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Srrm3Q80WV7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.52■■□□□ 1.2
Srrm3Q80WV7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.52■■□□□ 1.2
Srrm3Q80WV7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Srrm3Q80WV7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.51■■□□□ 1.19
Srrm3Q80WV7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Srrm3Q80WV7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Srrm3Q80WV7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Srrm3Q80WV7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Srrm3Q80WV7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.5■■□□□ 1.19
Srrm3Q80WV7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Srrm3Q80WV7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.5■■□□□ 1.19
Srrm3Q80WV7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Srrm3Q80WV7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Srrm3Q80WV7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Srrm3Q80WV7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Srrm3Q80WV7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Srrm3Q80WV7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.48■■□□□ 1.19
Srrm3Q80WV7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Srrm3Q80WV7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Srrm3Q80WV7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Srrm3Q80WV7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Srrm3Q80WV7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Srrm3Q80WV7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Srrm3Q80WV7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Srrm3Q80WV7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Srrm3Q80WV7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Srrm3Q80WV7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Srrm3Q80WV7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Srrm3Q80WV7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Srrm3Q80WV7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Srrm3Q80WV7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Srrm3Q80WV7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Srrm3Q80WV7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.45■■□□□ 1.18
Srrm3Q80WV7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Srrm3Q80WV7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.45■■□□□ 1.18
Srrm3Q80WV7 Gm12366-201ENSMUST00000121722 873 ntBASIC22.45■■□□□ 1.18
Srrm3Q80WV7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.45■■□□□ 1.18
Srrm3Q80WV7 Gm37136-201ENSMUST00000194368 194 ntBASIC22.45■■□□□ 1.18
Srrm3Q80WV7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.45■■□□□ 1.18
Srrm3Q80WV7 Gm5786-201ENSMUST00000085368 882 ntBASIC22.45■■□□□ 1.18
Srrm3Q80WV7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Srrm3Q80WV7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.44■■□□□ 1.18
Srrm3Q80WV7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.44■■□□□ 1.18
Srrm3Q80WV7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Srrm3Q80WV7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Srrm3Q80WV7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms