Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx4Q7TNK1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx4Q7TNK1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx4Q7TNK1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx4Q7TNK1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx4Q7TNK1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx4Q7TNK1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx4Q7TNK1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx4Q7TNK1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx4Q7TNK1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx4Q7TNK1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx4Q7TNK1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rfx4Q7TNK1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx4Q7TNK1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx4Q7TNK1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rfx4Q7TNK1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx4Q7TNK1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx4Q7TNK1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx4Q7TNK1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx4Q7TNK1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx4Q7TNK1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx4Q7TNK1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx4Q7TNK1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.8■□□□□ 0.92
Rfx4Q7TNK1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rfx4Q7TNK1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.79■□□□□ 0.92
Rfx4Q7TNK1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx4Q7TNK1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx4Q7TNK1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx4Q7TNK1 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.79■□□□□ 0.92
Rfx4Q7TNK1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.79■□□□□ 0.92
Rfx4Q7TNK1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx4Q7TNK1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx4Q7TNK1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx4Q7TNK1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rfx4Q7TNK1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx4Q7TNK1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Rfx4Q7TNK1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx4Q7TNK1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.78■□□□□ 0.92
Rfx4Q7TNK1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.78■□□□□ 0.92
Rfx4Q7TNK1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx4Q7TNK1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx4Q7TNK1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx4Q7TNK1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfx4Q7TNK1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
Rfx4Q7TNK1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Rfx4Q7TNK1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfx4Q7TNK1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx4Q7TNK1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx4Q7TNK1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx4Q7TNK1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rfx4Q7TNK1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Rfx4Q7TNK1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.75■□□□□ 0.91
Rfx4Q7TNK1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx4Q7TNK1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rfx4Q7TNK1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx4Q7TNK1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx4Q7TNK1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx4Q7TNK1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.74■□□□□ 0.91
Rfx4Q7TNK1 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.74■□□□□ 0.91
Rfx4Q7TNK1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx4Q7TNK1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Rfx4Q7TNK1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx4Q7TNK1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx4Q7TNK1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx4Q7TNK1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.72■□□□□ 0.91
Rfx4Q7TNK1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.72■□□□□ 0.91
Rfx4Q7TNK1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rfx4Q7TNK1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx4Q7TNK1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx4Q7TNK1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx4Q7TNK1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx4Q7TNK1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx4Q7TNK1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.71■□□□□ 0.91
Rfx4Q7TNK1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rfx4Q7TNK1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx4Q7TNK1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx4Q7TNK1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx4Q7TNK1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx4Q7TNK1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx4Q7TNK1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx4Q7TNK1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx4Q7TNK1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx4Q7TNK1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rfx4Q7TNK1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx4Q7TNK1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx4Q7TNK1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.69■□□□□ 0.9
Rfx4Q7TNK1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.69■□□□□ 0.9
Rfx4Q7TNK1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms