Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp248Q640N4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp248Q640N4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp248Q640N4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp248Q640N4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Zfp248Q640N4 Gm22567-201ENSMUST00000175542 342 ntBASIC16.5■□□□□ 0.23
Zfp248Q640N4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp248Q640N4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.5■□□□□ 0.23
Zfp248Q640N4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp248Q640N4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.49■□□□□ 0.23
Zfp248Q640N4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp248Q640N4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp248Q640N4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp248Q640N4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp248Q640N4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp248Q640N4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp248Q640N4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp248Q640N4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp248Q640N4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Zfp248Q640N4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp248Q640N4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp248Q640N4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp248Q640N4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp248Q640N4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp248Q640N4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp248Q640N4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
Zfp248Q640N4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp248Q640N4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Zfp248Q640N4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp248Q640N4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp248Q640N4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp248Q640N4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp248Q640N4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp248Q640N4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp248Q640N4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Zfp248Q640N4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Zfp248Q640N4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Zfp248Q640N4 Gm44428-201ENSMUST00000204474 874 ntBASIC16.46■□□□□ 0.23
Zfp248Q640N4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.46■□□□□ 0.23
Zfp248Q640N4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp248Q640N4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp248Q640N4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp248Q640N4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zfp248Q640N4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.45■□□□□ 0.22
Zfp248Q640N4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.45■□□□□ 0.22
Zfp248Q640N4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zfp248Q640N4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Zfp248Q640N4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Zfp248Q640N4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Zfp248Q640N4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Zfp248Q640N4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Zfp248Q640N4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zfp248Q640N4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zfp248Q640N4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Zfp248Q640N4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zfp248Q640N4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Zfp248Q640N4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Zfp248Q640N4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Zfp248Q640N4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zfp248Q640N4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Zfp248Q640N4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zfp248Q640N4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zfp248Q640N4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zfp248Q640N4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Zfp248Q640N4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.43■□□□□ 0.22
Zfp248Q640N4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.43■□□□□ 0.22
Zfp248Q640N4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zfp248Q640N4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zfp248Q640N4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zfp248Q640N4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.42■□□□□ 0.22
Zfp248Q640N4 Gm9806-201ENSMUST00000051080 552 ntBASIC16.42■□□□□ 0.22
Zfp248Q640N4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zfp248Q640N4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zfp248Q640N4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zfp248Q640N4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zfp248Q640N4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.41■□□□□ 0.22
Zfp248Q640N4 Scarna2-201ENSMUST00000157560 414 ntBASIC16.41■□□□□ 0.22
Zfp248Q640N4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zfp248Q640N4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Zfp248Q640N4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Zfp248Q640N4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Zfp248Q640N4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zfp248Q640N4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zfp248Q640N4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zfp248Q640N4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Zfp248Q640N4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Zfp248Q640N4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zfp248Q640N4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Zfp248Q640N4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zfp248Q640N4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zfp248Q640N4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zfp248Q640N4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Zfp248Q640N4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.38■□□□□ 0.21
Zfp248Q640N4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.38■□□□□ 0.21
Zfp248Q640N4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Zfp248Q640N4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.38■□□□□ 0.21
Zfp248Q640N4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Zfp248Q640N4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zfp248Q640N4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zfp248Q640N4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms