Protein–RNA interactions for Protein: Q62513

Znf260, Zinc finger protein 260, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf260Q62513 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf260Q62513 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Znf260Q62513 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf260Q62513 Gm40881-201ENSMUST00000223397 166 ntBASIC19.31■□□□□ 0.68
Znf260Q62513 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf260Q62513 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf260Q62513 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Znf260Q62513 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf260Q62513 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf260Q62513 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Znf260Q62513 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Znf260Q62513 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Znf260Q62513 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf260Q62513 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf260Q62513 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.3■□□□□ 0.68
Znf260Q62513 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf260Q62513 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.3■□□□□ 0.68
Znf260Q62513 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf260Q62513 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf260Q62513 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.29■□□□□ 0.68
Znf260Q62513 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.29■□□□□ 0.68
Znf260Q62513 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Znf260Q62513 Gm9847-201ENSMUST00000052528 599 ntBASIC19.29■□□□□ 0.68
Znf260Q62513 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf260Q62513 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Znf260Q62513 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.28■□□□□ 0.68
Znf260Q62513 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf260Q62513 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Znf260Q62513 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf260Q62513 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf260Q62513 Gm22238-201ENSMUST00000175222 88 ntBASIC19.28■□□□□ 0.68
Znf260Q62513 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.28■□□□□ 0.68
Znf260Q62513 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf260Q62513 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf260Q62513 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.27■□□□□ 0.68
Znf260Q62513 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.27■□□□□ 0.68
Znf260Q62513 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf260Q62513 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf260Q62513 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Znf260Q62513 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf260Q62513 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.27■□□□□ 0.68
Znf260Q62513 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.27■□□□□ 0.67
Znf260Q62513 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf260Q62513 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf260Q62513 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf260Q62513 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf260Q62513 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.26■□□□□ 0.67
Znf260Q62513 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf260Q62513 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf260Q62513 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf260Q62513 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Znf260Q62513 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf260Q62513 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf260Q62513 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf260Q62513 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Znf260Q62513 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Znf260Q62513 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Znf260Q62513 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Znf260Q62513 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Znf260Q62513 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.23■□□□□ 0.67
Znf260Q62513 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Znf260Q62513 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.23■□□□□ 0.67
Znf260Q62513 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Znf260Q62513 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Znf260Q62513 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf260Q62513 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Znf260Q62513 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf260Q62513 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Znf260Q62513 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Znf260Q62513 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Znf260Q62513 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf260Q62513 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.22■□□□□ 0.67
Znf260Q62513 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf260Q62513 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Znf260Q62513 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Znf260Q62513 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.21■□□□□ 0.67
Znf260Q62513 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.21■□□□□ 0.67
Znf260Q62513 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.21■□□□□ 0.67
Znf260Q62513 Gm10399-202ENSMUST00000202768 748 ntBASIC19.21■□□□□ 0.67
Znf260Q62513 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.21■□□□□ 0.67
Znf260Q62513 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Znf260Q62513 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Znf260Q62513 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Znf260Q62513 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Znf260Q62513 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Znf260Q62513 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Znf260Q62513 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf260Q62513 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf260Q62513 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.2■□□□□ 0.66
Znf260Q62513 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf260Q62513 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf260Q62513 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf260Q62513 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Znf260Q62513 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf260Q62513 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Znf260Q62513 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Znf260Q62513 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Znf260Q62513 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Znf260Q62513 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Znf260Q62513 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms