Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.89■□□□□ 0.94
Spg11Q3UHA3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Spg11Q3UHA3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Spg11Q3UHA3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.88■□□□□ 0.93
Spg11Q3UHA3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.88■□□□□ 0.93
Spg11Q3UHA3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.88■□□□□ 0.93
Spg11Q3UHA3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Spg11Q3UHA3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.87■□□□□ 0.93
Spg11Q3UHA3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Spg11Q3UHA3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Spg11Q3UHA3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Spg11Q3UHA3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Spg11Q3UHA3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.86■□□□□ 0.93
Spg11Q3UHA3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Spg11Q3UHA3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Spg11Q3UHA3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Spg11Q3UHA3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Spg11Q3UHA3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Spg11Q3UHA3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Spg11Q3UHA3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Spg11Q3UHA3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Spg11Q3UHA3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.85■□□□□ 0.93
Spg11Q3UHA3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Spg11Q3UHA3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Spg11Q3UHA3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Spg11Q3UHA3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Spg11Q3UHA3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Spg11Q3UHA3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Spg11Q3UHA3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.84■□□□□ 0.93
Spg11Q3UHA3 Gm26571-201ENSMUST00000181399 666 ntBASIC20.84■□□□□ 0.93
Spg11Q3UHA3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Spg11Q3UHA3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.84■□□□□ 0.93
Spg11Q3UHA3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Spg11Q3UHA3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Spg11Q3UHA3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Spg11Q3UHA3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Spg11Q3UHA3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.83■□□□□ 0.92
Spg11Q3UHA3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
Spg11Q3UHA3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Spg11Q3UHA3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.82■□□□□ 0.92
Spg11Q3UHA3 Gm27405-201ENSMUST00000184201 112 ntBASIC20.82■□□□□ 0.92
Spg11Q3UHA3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Spg11Q3UHA3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.82■□□□□ 0.92
Spg11Q3UHA3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.82■□□□□ 0.92
Spg11Q3UHA3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Spg11Q3UHA3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Spg11Q3UHA3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Spg11Q3UHA3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Spg11Q3UHA3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Spg11Q3UHA3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Spg11Q3UHA3 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.8■□□□□ 0.92
Spg11Q3UHA3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Spg11Q3UHA3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Spg11Q3UHA3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Spg11Q3UHA3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Spg11Q3UHA3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Spg11Q3UHA3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Spg11Q3UHA3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Spg11Q3UHA3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Spg11Q3UHA3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Spg11Q3UHA3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Spg11Q3UHA3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Spg11Q3UHA3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Spg11Q3UHA3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Spg11Q3UHA3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Spg11Q3UHA3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Spg11Q3UHA3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
Spg11Q3UHA3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Spg11Q3UHA3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.77■□□□□ 0.92
Spg11Q3UHA3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Spg11Q3UHA3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.77■□□□□ 0.92
Spg11Q3UHA3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.77■□□□□ 0.92
Spg11Q3UHA3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Spg11Q3UHA3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Spg11Q3UHA3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Spg11Q3UHA3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
Spg11Q3UHA3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.76■□□□□ 0.91
Spg11Q3UHA3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
Spg11Q3UHA3 Gm10849-201ENSMUST00000100397 618 ntBASIC20.75■□□□□ 0.91
Spg11Q3UHA3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Spg11Q3UHA3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Spg11Q3UHA3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Spg11Q3UHA3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Spg11Q3UHA3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Spg11Q3UHA3 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.75■□□□□ 0.91
Spg11Q3UHA3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.74■□□□□ 0.91
Spg11Q3UHA3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Spg11Q3UHA3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Spg11Q3UHA3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Spg11Q3UHA3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.73■□□□□ 0.91
Spg11Q3UHA3 Spcs1-204ENSMUST00000226782 949 ntBASIC20.73■□□□□ 0.91
Spg11Q3UHA3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Spg11Q3UHA3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Spg11Q3UHA3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Spg11Q3UHA3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Spg11Q3UHA3 Gm10399-202ENSMUST00000202768 748 ntBASIC20.72■□□□□ 0.91
Spg11Q3UHA3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Spg11Q3UHA3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Spg11Q3UHA3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Spg11Q3UHA3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms