Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Fndc4Q3TR08 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fndc4Q3TR08 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Fndc4Q3TR08 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fndc4Q3TR08 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.41■□□□□ 0.54
Fndc4Q3TR08 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Fndc4Q3TR08 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fndc4Q3TR08 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fndc4Q3TR08 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Fndc4Q3TR08 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.4■□□□□ 0.54
Fndc4Q3TR08 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Fndc4Q3TR08 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fndc4Q3TR08 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Fndc4Q3TR08 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.39■□□□□ 0.53
Fndc4Q3TR08 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fndc4Q3TR08 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fndc4Q3TR08 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Fndc4Q3TR08 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fndc4Q3TR08 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.39■□□□□ 0.53
Fndc4Q3TR08 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fndc4Q3TR08 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fndc4Q3TR08 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fndc4Q3TR08 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fndc4Q3TR08 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Fndc4Q3TR08 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Fndc4Q3TR08 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.37■□□□□ 0.53
Fndc4Q3TR08 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Fndc4Q3TR08 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Fndc4Q3TR08 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fndc4Q3TR08 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fndc4Q3TR08 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fndc4Q3TR08 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Fndc4Q3TR08 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fndc4Q3TR08 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Fndc4Q3TR08 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Fndc4Q3TR08 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fndc4Q3TR08 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Fndc4Q3TR08 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.36■□□□□ 0.53
Fndc4Q3TR08 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fndc4Q3TR08 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fndc4Q3TR08 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fndc4Q3TR08 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.35■□□□□ 0.53
Fndc4Q3TR08 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Fndc4Q3TR08 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.35■□□□□ 0.53
Fndc4Q3TR08 Gm45364-201ENSMUST00000210883 159 ntBASIC18.35■□□□□ 0.53
Fndc4Q3TR08 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.35■□□□□ 0.53
Fndc4Q3TR08 Gm9812-201ENSMUST00000061934 968 ntBASIC18.35■□□□□ 0.53
Fndc4Q3TR08 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fndc4Q3TR08 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Fndc4Q3TR08 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Fndc4Q3TR08 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fndc4Q3TR08 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Fndc4Q3TR08 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Fndc4Q3TR08 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Fndc4Q3TR08 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Fndc4Q3TR08 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Fndc4Q3TR08 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fndc4Q3TR08 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.33■□□□□ 0.52
Fndc4Q3TR08 Gm6311-201ENSMUST00000073790 878 ntBASIC18.33■□□□□ 0.52
Fndc4Q3TR08 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Fndc4Q3TR08 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.33■□□□□ 0.52
Fndc4Q3TR08 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.32■□□□□ 0.52
Fndc4Q3TR08 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Fndc4Q3TR08 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Fndc4Q3TR08 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.32■□□□□ 0.52
Fndc4Q3TR08 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Fndc4Q3TR08 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fndc4Q3TR08 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fndc4Q3TR08 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fndc4Q3TR08 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Fndc4Q3TR08 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.31■□□□□ 0.52
Fndc4Q3TR08 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.31■□□□□ 0.52
Fndc4Q3TR08 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fndc4Q3TR08 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fndc4Q3TR08 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fndc4Q3TR08 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fndc4Q3TR08 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.3■□□□□ 0.52
Fndc4Q3TR08 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fndc4Q3TR08 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fndc4Q3TR08 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fndc4Q3TR08 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Fndc4Q3TR08 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.3■□□□□ 0.52
Fndc4Q3TR08 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.3■□□□□ 0.52
Fndc4Q3TR08 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fndc4Q3TR08 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fndc4Q3TR08 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fndc4Q3TR08 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fndc4Q3TR08 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fndc4Q3TR08 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Fndc4Q3TR08 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.29■□□□□ 0.52
Fndc4Q3TR08 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fndc4Q3TR08 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Fndc4Q3TR08 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fndc4Q3TR08 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fndc4Q3TR08 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fndc4Q3TR08 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fndc4Q3TR08 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fndc4Q3TR08 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Fndc4Q3TR08 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Fndc4Q3TR08 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms