Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Uba52P62984 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Uba52P62984 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.73■□□□□ 0.59
Uba52P62984 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Uba52P62984 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Uba52P62984 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Uba52P62984 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.72■□□□□ 0.59
Uba52P62984 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.72■□□□□ 0.59
Uba52P62984 Gm16437-201ENSMUST00000025669 507 ntBASIC18.72■□□□□ 0.59
Uba52P62984 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Uba52P62984 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Uba52P62984 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Uba52P62984 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Uba52P62984 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Uba52P62984 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.71■□□□□ 0.59
Uba52P62984 Gm12366-201ENSMUST00000121722 873 ntBASIC18.71■□□□□ 0.59
Uba52P62984 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.71■□□□□ 0.59
Uba52P62984 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.71■□□□□ 0.59
Uba52P62984 Gm5786-201ENSMUST00000085368 882 ntBASIC18.71■□□□□ 0.59
Uba52P62984 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uba52P62984 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Uba52P62984 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.71■□□□□ 0.58
Uba52P62984 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uba52P62984 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uba52P62984 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uba52P62984 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uba52P62984 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.7■□□□□ 0.58
Uba52P62984 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uba52P62984 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Uba52P62984 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uba52P62984 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uba52P62984 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.69■□□□□ 0.58
Uba52P62984 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba52P62984 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Uba52P62984 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.69■□□□□ 0.58
Uba52P62984 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba52P62984 Mir3960-201ENSMUST00000198213 73 ntBASIC18.69■□□□□ 0.58
Uba52P62984 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Uba52P62984 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Uba52P62984 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Uba52P62984 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Uba52P62984 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.67■□□□□ 0.58
Uba52P62984 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Uba52P62984 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Uba52P62984 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Uba52P62984 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Uba52P62984 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba52P62984 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Uba52P62984 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.66■□□□□ 0.58
Uba52P62984 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.66■□□□□ 0.58
Uba52P62984 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba52P62984 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Uba52P62984 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Uba52P62984 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba52P62984 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Uba52P62984 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba52P62984 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba52P62984 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba52P62984 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Uba52P62984 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Uba52P62984 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Uba52P62984 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Uba52P62984 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Uba52P62984 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Uba52P62984 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Uba52P62984 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Uba52P62984 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Uba52P62984 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Uba52P62984 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Uba52P62984 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Uba52P62984 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Uba52P62984 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Uba52P62984 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Uba52P62984 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.64■□□□□ 0.57
Uba52P62984 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Uba52P62984 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Uba52P62984 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Uba52P62984 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Uba52P62984 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Uba52P62984 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uba52P62984 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uba52P62984 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uba52P62984 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uba52P62984 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uba52P62984 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Uba52P62984 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Uba52P62984 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Uba52P62984 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Uba52P62984 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Uba52P62984 Gm45364-201ENSMUST00000210883 159 ntBASIC18.62■□□□□ 0.57
Uba52P62984 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Uba52P62984 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Uba52P62984 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Uba52P62984 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Uba52P62984 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Uba52P62984 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uba52P62984 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Uba52P62984 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Uba52P62984 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Uba52P62984 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms