Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Mmp20P57748 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Mmp20P57748 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Mmp20P57748 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Mmp20P57748 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp20P57748 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp20P57748 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.34■■□□□ 1.65
Mmp20P57748 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Mmp20P57748 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp20P57748 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp20P57748 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp20P57748 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.34■■□□□ 1.65
Mmp20P57748 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp20P57748 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Mmp20P57748 Gm40881-201ENSMUST00000223397 166 ntBASIC25.33■■□□□ 1.65
Mmp20P57748 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Mmp20P57748 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Mmp20P57748 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Mmp20P57748 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Mmp20P57748 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.32■■□□□ 1.64
Mmp20P57748 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC25.32■■□□□ 1.64
Mmp20P57748 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Mmp20P57748 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
Mmp20P57748 Gm22238-201ENSMUST00000175222 88 ntBASIC25.31■■□□□ 1.64
Mmp20P57748 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.31■■□□□ 1.64
Mmp20P57748 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Mmp20P57748 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Mmp20P57748 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Mmp20P57748 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Mmp20P57748 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.31■■□□□ 1.64
Mmp20P57748 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Mmp20P57748 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Mmp20P57748 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Mmp20P57748 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Mmp20P57748 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Mmp20P57748 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.3■■□□□ 1.64
Mmp20P57748 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.29■■□□□ 1.64
Mmp20P57748 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Mmp20P57748 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Mmp20P57748 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Mmp20P57748 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Mmp20P57748 Gm9847-201ENSMUST00000052528 599 ntBASIC25.29■■□□□ 1.64
Mmp20P57748 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Mmp20P57748 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Mmp20P57748 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25.29■■□□□ 1.64
Mmp20P57748 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Mmp20P57748 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.28■■□□□ 1.64
Mmp20P57748 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Mmp20P57748 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25.28■■□□□ 1.64
Mmp20P57748 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Mmp20P57748 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC25.27■■□□□ 1.64
Mmp20P57748 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Mmp20P57748 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Mmp20P57748 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Mmp20P57748 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Mmp20P57748 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.26■■□□□ 1.63
Mmp20P57748 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.26■■□□□ 1.63
Mmp20P57748 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.26■■□□□ 1.63
Mmp20P57748 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Mmp20P57748 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Mmp20P57748 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.25■■□□□ 1.63
Mmp20P57748 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Mmp20P57748 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Mmp20P57748 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.25■■□□□ 1.63
Mmp20P57748 Gm21956-201ENSMUST00000179946 522 ntBASIC25.24■■□□□ 1.63
Mmp20P57748 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Mmp20P57748 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Mmp20P57748 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC25.23■■□□□ 1.63
Mmp20P57748 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.23■■□□□ 1.63
Mmp20P57748 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Mmp20P57748 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Mmp20P57748 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.23■■□□□ 1.63
Mmp20P57748 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
Mmp20P57748 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Mmp20P57748 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Mmp20P57748 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Mmp20P57748 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Mmp20P57748 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Mmp20P57748 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.22■■□□□ 1.63
Mmp20P57748 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Mmp20P57748 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC25.21■■□□□ 1.63
Mmp20P57748 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Mmp20P57748 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Mmp20P57748 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Mmp20P57748 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Mmp20P57748 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Mmp20P57748 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Mmp20P57748 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Mmp20P57748 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Mmp20P57748 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Mmp20P57748 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Mmp20P57748 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.17■■□□□ 1.62
Mmp20P57748 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Mmp20P57748 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Mmp20P57748 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Mmp20P57748 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Mmp20P57748 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Mmp20P57748 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Mmp20P57748 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Mmp20P57748 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms