Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.09■□□□□ 0.97
Gli1P47806 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gli1P47806 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gli1P47806 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gli1P47806 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gli1P47806 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Gli1P47806 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli1P47806 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.07■□□□□ 0.96
Gli1P47806 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli1P47806 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli1P47806 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gli1P47806 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli1P47806 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli1P47806 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli1P47806 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli1P47806 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gli1P47806 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.06■□□□□ 0.96
Gli1P47806 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.06■□□□□ 0.96
Gli1P47806 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Gli1P47806 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gli1P47806 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gli1P47806 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.06■□□□□ 0.96
Gli1P47806 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gli1P47806 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.06■□□□□ 0.96
Gli1P47806 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gli1P47806 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Gli1P47806 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Gli1P47806 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.05■□□□□ 0.96
Gli1P47806 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Gli1P47806 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gli1P47806 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gli1P47806 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gli1P47806 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gli1P47806 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gli1P47806 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Gli1P47806 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gli1P47806 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gli1P47806 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gli1P47806 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Gli1P47806 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.03■□□□□ 0.96
Gli1P47806 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Gli1P47806 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gli1P47806 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Gli1P47806 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gli1P47806 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gli1P47806 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Gli1P47806 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gli1P47806 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gli1P47806 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gli1P47806 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gli1P47806 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Gli1P47806 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Gli1P47806 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21■□□□□ 0.95
Gli1P47806 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gli1P47806 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gli1P47806 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.99■□□□□ 0.95
Gli1P47806 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gli1P47806 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gli1P47806 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gli1P47806 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.98■□□□□ 0.95
Gli1P47806 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gli1P47806 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gli1P47806 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gli1P47806 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.98■□□□□ 0.95
Gli1P47806 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gli1P47806 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gli1P47806 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gli1P47806 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.97■□□□□ 0.95
Gli1P47806 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.97■□□□□ 0.95
Gli1P47806 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.97■□□□□ 0.95
Gli1P47806 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gli1P47806 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Gli1P47806 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gli1P47806 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.96■□□□□ 0.95
Gli1P47806 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.96■□□□□ 0.95
Gli1P47806 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Gli1P47806 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gli1P47806 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Gli1P47806 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Gli1P47806 Gm14523-201ENSMUST00000117260 558 ntBASIC20.95■□□□□ 0.94
Gli1P47806 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Gli1P47806 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gli1P47806 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli1P47806 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli1P47806 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Gli1P47806 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli1P47806 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Gli1P47806 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gli1P47806 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gli1P47806 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gli1P47806 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gli1P47806 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gli1P47806 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gli1P47806 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli1P47806 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli1P47806 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Gli1P47806 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gli1P47806 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli1P47806 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gli1P47806 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms