Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim1P0C8K7 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.11■□□□□ 0.01
Smim1P0C8K7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim1P0C8K7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim1P0C8K7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim1P0C8K7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smim1P0C8K7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim1P0C8K7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smim1P0C8K7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smim1P0C8K7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim1P0C8K7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim1P0C8K7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smim1P0C8K7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smim1P0C8K7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Smim1P0C8K7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smim1P0C8K7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smim1P0C8K7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim1P0C8K7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim1P0C8K7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.08■□□□□ 0
Smim1P0C8K7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim1P0C8K7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim1P0C8K7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Smim1P0C8K7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim1P0C8K7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smim1P0C8K7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smim1P0C8K7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Smim1P0C8K7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Smim1P0C8K7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smim1P0C8K7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smim1P0C8K7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smim1P0C8K7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Smim1P0C8K7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smim1P0C8K7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smim1P0C8K7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smim1P0C8K7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Smim1P0C8K7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smim1P0C8K7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Smim1P0C8K7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.05■□□□□ 0
Smim1P0C8K7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smim1P0C8K7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smim1P0C8K7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.05■□□□□ -0
Smim1P0C8K7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smim1P0C8K7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smim1P0C8K7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Smim1P0C8K7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.05■□□□□ -0
Smim1P0C8K7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Smim1P0C8K7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smim1P0C8K7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smim1P0C8K7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Smim1P0C8K7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smim1P0C8K7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smim1P0C8K7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smim1P0C8K7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
Smim1P0C8K7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim1P0C8K7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.03■□□□□ -0
Smim1P0C8K7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.03■□□□□ -0
Smim1P0C8K7 Gm26115-201ENSMUST00000175605 87 ntBASIC15.03■□□□□ -0
Smim1P0C8K7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smim1P0C8K7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim1P0C8K7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smim1P0C8K7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Smim1P0C8K7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smim1P0C8K7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smim1P0C8K7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smim1P0C8K7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smim1P0C8K7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smim1P0C8K7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim1P0C8K7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim1P0C8K7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim1P0C8K7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smim1P0C8K7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smim1P0C8K7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smim1P0C8K7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Smim1P0C8K7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15□□□□□ -0.01
Smim1P0C8K7 Gm30023-201ENSMUST00000197970 889 ntBASIC15□□□□□ -0.01
Smim1P0C8K7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smim1P0C8K7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smim1P0C8K7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smim1P0C8K7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smim1P0C8K7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smim1P0C8K7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smim1P0C8K7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smim1P0C8K7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smim1P0C8K7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Smim1P0C8K7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smim1P0C8K7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smim1P0C8K7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Smim1P0C8K7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smim1P0C8K7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smim1P0C8K7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smim1P0C8K7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smim1P0C8K7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smim1P0C8K7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smim1P0C8K7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smim1P0C8K7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smim1P0C8K7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smim1P0C8K7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smim1P0C8K7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smim1P0C8K7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smim1P0C8K7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms