Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
P06336 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P06336 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P06336 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P06336 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
P06336 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.07■□□□□ 0.8
P06336 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
P06336 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.07■□□□□ 0.8
P06336 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P06336 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P06336 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P06336 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P06336 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
P06336 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P06336 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.06■□□□□ 0.8
P06336 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P06336 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P06336 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P06336 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
P06336 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
P06336 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.05■□□□□ 0.8
P06336 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P06336 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
P06336 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P06336 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
P06336 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P06336 Gm22567-201ENSMUST00000175542 342 ntBASIC20.04■□□□□ 0.8
P06336 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P06336 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P06336 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
P06336 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.03■□□□□ 0.8
P06336 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
P06336 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P06336 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P06336 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P06336 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P06336 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P06336 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
P06336 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
P06336 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
P06336 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P06336 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
P06336 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
P06336 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
P06336 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P06336 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P06336 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P06336 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P06336 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P06336 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20■□□□□ 0.79
P06336 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
P06336 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20■□□□□ 0.79
P06336 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20■□□□□ 0.79
P06336 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06336 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
P06336 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06336 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06336 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
P06336 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
P06336 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06336 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06336 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06336 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
P06336 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
P06336 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P06336 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P06336 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
P06336 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P06336 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
P06336 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.97■□□□□ 0.79
P06336 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P06336 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
P06336 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P06336 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P06336 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.96■□□□□ 0.79
P06336 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P06336 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
P06336 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
P06336 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P06336 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.95■□□□□ 0.78
P06336 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
P06336 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
P06336 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
P06336 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
P06336 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P06336 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
P06336 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P06336 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
P06336 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
P06336 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P06336 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P06336 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
P06336 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P06336 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.94■□□□□ 0.78
P06336 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P06336 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P06336 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P06336 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P06336 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P06336 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms