Protein–RNA interactions for Protein: P01798

Ig heavy chain V-III region E109, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01798 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01798 Gm14523-201ENSMUST00000117260 558 ntBASIC18.52■□□□□ 0.56
P01798 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.52■□□□□ 0.56
P01798 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01798 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P01798 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P01798 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.51■□□□□ 0.55
P01798 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01798 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01798 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.51■□□□□ 0.55
P01798 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
P01798 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.51■□□□□ 0.55
P01798 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
P01798 Gm27502-201ENSMUST00000183495 199 ntBASIC18.5■□□□□ 0.55
P01798 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
P01798 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
P01798 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01798 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01798 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01798 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.5■□□□□ 0.55
P01798 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01798 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P01798 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
P01798 Terc-201ENSMUST00000082862 423 ntBASIC18.49■□□□□ 0.55
P01798 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P01798 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
P01798 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
P01798 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01798 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.48■□□□□ 0.55
P01798 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
P01798 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01798 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01798 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01798 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01798 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
P01798 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01798 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
P01798 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01798 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.47■□□□□ 0.55
P01798 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01798 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
P01798 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.46■□□□□ 0.55
P01798 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.46■□□□□ 0.55
P01798 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
P01798 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
P01798 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01798 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
P01798 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.46■□□□□ 0.55
P01798 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.46■□□□□ 0.55
P01798 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
P01798 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01798 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01798 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01798 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P01798 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P01798 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01798 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01798 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01798 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01798 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01798 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
P01798 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
P01798 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01798 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.43■□□□□ 0.54
P01798 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01798 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01798 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01798 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
P01798 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01798 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.42■□□□□ 0.54
P01798 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01798 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01798 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01798 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01798 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
P01798 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P01798 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01798 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01798 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.41■□□□□ 0.54
P01798 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.41■□□□□ 0.54
P01798 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01798 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
P01798 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01798 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P01798 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01798 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01798 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01798 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
P01798 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
P01798 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01798 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
P01798 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
P01798 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01798 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01798 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01798 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01798 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.4■□□□□ 0.54
P01798 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
P01798 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
P01798 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms