Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tgfbr3O88393 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tgfbr3O88393 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tgfbr3O88393 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.89■□□□□ 0.93
Tgfbr3O88393 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.89■□□□□ 0.93
Tgfbr3O88393 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.89■□□□□ 0.93
Tgfbr3O88393 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tgfbr3O88393 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.89■□□□□ 0.93
Tgfbr3O88393 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Tgfbr3O88393 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tgfbr3O88393 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tgfbr3O88393 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Tgfbr3O88393 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tgfbr3O88393 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tgfbr3O88393 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tgfbr3O88393 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tgfbr3O88393 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tgfbr3O88393 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tgfbr3O88393 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.87■□□□□ 0.93
Tgfbr3O88393 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.87■□□□□ 0.93
Tgfbr3O88393 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tgfbr3O88393 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tgfbr3O88393 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tgfbr3O88393 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Tgfbr3O88393 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tgfbr3O88393 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfbr3O88393 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfbr3O88393 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfbr3O88393 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfbr3O88393 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.85■□□□□ 0.93
Tgfbr3O88393 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.85■□□□□ 0.93
Tgfbr3O88393 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.85■□□□□ 0.93
Tgfbr3O88393 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfbr3O88393 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfbr3O88393 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tgfbr3O88393 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Tgfbr3O88393 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tgfbr3O88393 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.84■□□□□ 0.93
Tgfbr3O88393 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tgfbr3O88393 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tgfbr3O88393 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.83■□□□□ 0.93
Tgfbr3O88393 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tgfbr3O88393 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Tgfbr3O88393 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tgfbr3O88393 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Tgfbr3O88393 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tgfbr3O88393 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tgfbr3O88393 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tgfbr3O88393 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.82■□□□□ 0.92
Tgfbr3O88393 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.82■□□□□ 0.92
Tgfbr3O88393 Gm13241-201ENSMUST00000094493 780 ntBASIC20.82■□□□□ 0.92
Tgfbr3O88393 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tgfbr3O88393 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Tgfbr3O88393 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tgfbr3O88393 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tgfbr3O88393 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tgfbr3O88393 Gm40881-201ENSMUST00000223397 166 ntBASIC20.81■□□□□ 0.92
Tgfbr3O88393 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Tgfbr3O88393 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfbr3O88393 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfbr3O88393 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfbr3O88393 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfbr3O88393 Gm22238-201ENSMUST00000175222 88 ntBASIC20.8■□□□□ 0.92
Tgfbr3O88393 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfbr3O88393 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfbr3O88393 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.79■□□□□ 0.92
Tgfbr3O88393 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Tgfbr3O88393 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.79■□□□□ 0.92
Tgfbr3O88393 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tgfbr3O88393 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.77■□□□□ 0.92
Tgfbr3O88393 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tgfbr3O88393 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.77■□□□□ 0.92
Tgfbr3O88393 Gm9847-201ENSMUST00000052528 599 ntBASIC20.77■□□□□ 0.92
Tgfbr3O88393 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tgfbr3O88393 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.77■□□□□ 0.91
Tgfbr3O88393 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tgfbr3O88393 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tgfbr3O88393 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tgfbr3O88393 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.76■□□□□ 0.91
Tgfbr3O88393 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tgfbr3O88393 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.76■□□□□ 0.91
Tgfbr3O88393 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.75■□□□□ 0.91
Tgfbr3O88393 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tgfbr3O88393 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms