Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tgfbr3O88393 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tgfbr3O88393 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tgfbr3O88393 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.89■□□□□ 0.93
Tgfbr3O88393 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.89■□□□□ 0.93
Tgfbr3O88393 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.89■□□□□ 0.93
Tgfbr3O88393 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tgfbr3O88393 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.89■□□□□ 0.93
Tgfbr3O88393 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Tgfbr3O88393 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tgfbr3O88393 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tgfbr3O88393 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Tgfbr3O88393 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tgfbr3O88393 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tgfbr3O88393 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tgfbr3O88393 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tgfbr3O88393 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tgfbr3O88393 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tgfbr3O88393 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.87■□□□□ 0.93
Tgfbr3O88393 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.87■□□□□ 0.93
Tgfbr3O88393 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tgfbr3O88393 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tgfbr3O88393 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tgfbr3O88393 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Tgfbr3O88393 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tgfbr3O88393 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfbr3O88393 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfbr3O88393 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfbr3O88393 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfbr3O88393 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.85■□□□□ 0.93
Tgfbr3O88393 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.85■□□□□ 0.93
Tgfbr3O88393 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.85■□□□□ 0.93
Tgfbr3O88393 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfbr3O88393 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfbr3O88393 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tgfbr3O88393 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Tgfbr3O88393 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tgfbr3O88393 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.84■□□□□ 0.93
Tgfbr3O88393 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tgfbr3O88393 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tgfbr3O88393 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.83■□□□□ 0.93
Tgfbr3O88393 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tgfbr3O88393 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Tgfbr3O88393 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tgfbr3O88393 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Tgfbr3O88393 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tgfbr3O88393 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tgfbr3O88393 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tgfbr3O88393 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.82■□□□□ 0.92
Tgfbr3O88393 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.82■□□□□ 0.92
Tgfbr3O88393 Gm13241-201ENSMUST00000094493 780 ntBASIC20.82■□□□□ 0.92
Tgfbr3O88393 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tgfbr3O88393 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Tgfbr3O88393 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tgfbr3O88393 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tgfbr3O88393 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tgfbr3O88393 Gm40881-201ENSMUST00000223397 166 ntBASIC20.81■□□□□ 0.92
Tgfbr3O88393 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Tgfbr3O88393 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfbr3O88393 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfbr3O88393 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfbr3O88393 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfbr3O88393 Gm22238-201ENSMUST00000175222 88 ntBASIC20.8■□□□□ 0.92
Tgfbr3O88393 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfbr3O88393 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfbr3O88393 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.79■□□□□ 0.92
Tgfbr3O88393 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Tgfbr3O88393 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.79■□□□□ 0.92
Tgfbr3O88393 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfbr3O88393 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfbr3O88393 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tgfbr3O88393 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.77■□□□□ 0.92
Tgfbr3O88393 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tgfbr3O88393 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.77■□□□□ 0.92
Tgfbr3O88393 Gm9847-201ENSMUST00000052528 599 ntBASIC20.77■□□□□ 0.92
Tgfbr3O88393 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tgfbr3O88393 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.77■□□□□ 0.91
Tgfbr3O88393 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tgfbr3O88393 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tgfbr3O88393 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tgfbr3O88393 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.76■□□□□ 0.91
Tgfbr3O88393 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tgfbr3O88393 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.76■□□□□ 0.91
Tgfbr3O88393 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.75■□□□□ 0.91
Tgfbr3O88393 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tgfbr3O88393 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms