Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Ubr1O70481 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
Ubr1O70481 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ubr1O70481 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC29.13■■■□□ 2.25
Ubr1O70481 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ubr1O70481 Gm28536-201ENSMUST00000190971 1317 ntBASIC29.12■■■□□ 2.25
Ubr1O70481 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ubr1O70481 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
Ubr1O70481 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC29.11■■■□□ 2.25
Ubr1O70481 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC29.11■■■□□ 2.25
Ubr1O70481 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Ubr1O70481 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ubr1O70481 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Ubr1O70481 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC29.1■■■□□ 2.25
Ubr1O70481 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Ubr1O70481 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC29.09■■■□□ 2.25
Ubr1O70481 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ubr1O70481 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC29.09■■■□□ 2.25
Ubr1O70481 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ubr1O70481 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC29.08■■■□□ 2.25
Ubr1O70481 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC29.08■■■□□ 2.25
Ubr1O70481 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ubr1O70481 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Ubr1O70481 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
Ubr1O70481 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ubr1O70481 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC29.08■■■□□ 2.25
Ubr1O70481 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC29.08■■■□□ 2.25
Ubr1O70481 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
Ubr1O70481 Gm28731-201ENSMUST00000185564 1569 ntBASIC29.07■■■□□ 2.24
Ubr1O70481 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Ubr1O70481 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC29.07■■■□□ 2.24
Ubr1O70481 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC29.06■■■□□ 2.24
Ubr1O70481 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ubr1O70481 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Ubr1O70481 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ubr1O70481 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Ubr1O70481 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC29.05■■■□□ 2.24
Ubr1O70481 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Ubr1O70481 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ubr1O70481 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ubr1O70481 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ubr1O70481 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC29.05■■■□□ 2.24
Ubr1O70481 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ubr1O70481 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ubr1O70481 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
Ubr1O70481 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Ubr1O70481 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Ubr1O70481 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Ubr1O70481 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Ubr1O70481 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
Ubr1O70481 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ubr1O70481 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ubr1O70481 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
Ubr1O70481 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Ubr1O70481 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Ubr1O70481 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Ubr1O70481 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
Ubr1O70481 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Ubr1O70481 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC29.01■■■□□ 2.23
Ubr1O70481 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC29.01■■■□□ 2.23
Ubr1O70481 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Ubr1O70481 Etf1-202ENSMUST00000180351 108 ntBASIC29.01■■■□□ 2.23
Ubr1O70481 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Ubr1O70481 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ubr1O70481 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ubr1O70481 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC28.99■■■□□ 2.23
Ubr1O70481 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ubr1O70481 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ubr1O70481 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Ubr1O70481 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC28.98■■■□□ 2.23
Ubr1O70481 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ubr1O70481 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ubr1O70481 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC28.97■■■□□ 2.23
Ubr1O70481 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ubr1O70481 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ubr1O70481 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC28.96■■■□□ 2.23
Ubr1O70481 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Ubr1O70481 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Ubr1O70481 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC28.96■■■□□ 2.23
Ubr1O70481 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC28.96■■■□□ 2.23
Ubr1O70481 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC28.95■■■□□ 2.22
Ubr1O70481 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC28.95■■■□□ 2.22
Ubr1O70481 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ubr1O70481 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
Ubr1O70481 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC28.94■■■□□ 2.22
Ubr1O70481 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
Ubr1O70481 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ubr1O70481 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ubr1O70481 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC28.93■■■□□ 2.22
Ubr1O70481 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ubr1O70481 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ubr1O70481 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC28.93■■■□□ 2.22
Ubr1O70481 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ubr1O70481 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
Ubr1O70481 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC28.92■■■□□ 2.22
Ubr1O70481 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Ubr1O70481 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
Ubr1O70481 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ubr1O70481 Gm11847-201ENSMUST00000125165 1119 ntBASIC28.9■■■□□ 2.22
Ubr1O70481 Gm22238-201ENSMUST00000175222 88 ntBASIC28.9■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms