Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pdlim1O70400 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pdlim1O70400 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdlim1O70400 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdlim1O70400 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pdlim1O70400 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.55■■□□□ 1.04
Pdlim1O70400 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdlim1O70400 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdlim1O70400 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.55■■□□□ 1.04
Pdlim1O70400 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pdlim1O70400 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pdlim1O70400 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pdlim1O70400 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pdlim1O70400 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pdlim1O70400 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pdlim1O70400 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pdlim1O70400 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pdlim1O70400 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pdlim1O70400 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pdlim1O70400 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Pdlim1O70400 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pdlim1O70400 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pdlim1O70400 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Pdlim1O70400 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Pdlim1O70400 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Pdlim1O70400 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim1O70400 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim1O70400 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim1O70400 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.51■■□□□ 1.03
Pdlim1O70400 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.51■■□□□ 1.03
Pdlim1O70400 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim1O70400 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim1O70400 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim1O70400 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim1O70400 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Pdlim1O70400 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim1O70400 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pdlim1O70400 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pdlim1O70400 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pdlim1O70400 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pdlim1O70400 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pdlim1O70400 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pdlim1O70400 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pdlim1O70400 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pdlim1O70400 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Pdlim1O70400 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.49■■□□□ 1.03
Pdlim1O70400 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pdlim1O70400 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Pdlim1O70400 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Pdlim1O70400 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pdlim1O70400 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.48■■□□□ 1.03
Pdlim1O70400 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pdlim1O70400 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pdlim1O70400 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pdlim1O70400 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pdlim1O70400 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pdlim1O70400 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pdlim1O70400 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.47■■□□□ 1.03
Pdlim1O70400 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pdlim1O70400 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.47■■□□□ 1.03
Pdlim1O70400 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pdlim1O70400 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.46■■□□□ 1.03
Pdlim1O70400 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pdlim1O70400 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pdlim1O70400 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pdlim1O70400 Gm5921-201ENSMUST00000075898 882 ntBASIC21.46■■□□□ 1.03
Pdlim1O70400 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pdlim1O70400 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pdlim1O70400 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pdlim1O70400 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pdlim1O70400 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim1O70400 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim1O70400 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim1O70400 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim1O70400 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim1O70400 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pdlim1O70400 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim1O70400 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Pdlim1O70400 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Pdlim1O70400 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim1O70400 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim1O70400 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.43■■□□□ 1.02
Pdlim1O70400 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim1O70400 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim1O70400 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pdlim1O70400 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.42■■□□□ 1.02
Pdlim1O70400 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pdlim1O70400 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Pdlim1O70400 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Pdlim1O70400 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim1O70400 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim1O70400 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.41■■□□□ 1.02
Pdlim1O70400 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim1O70400 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.4■■□□□ 1.02
Pdlim1O70400 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pdlim1O70400 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.4■■□□□ 1.02
Pdlim1O70400 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim1O70400 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim1O70400 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.4■■□□□ 1.02
Pdlim1O70400 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 171.8 ms