Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28043E0CXC2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm28043E0CXC2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm28043E0CXC2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Gm28043E0CXC2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.64■■□□□ 1.05
Gm28043E0CXC2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Gm28043E0CXC2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Gm28043E0CXC2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28043E0CXC2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28043E0CXC2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28043E0CXC2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28043E0CXC2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.63■■□□□ 1.05
Gm28043E0CXC2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28043E0CXC2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28043E0CXC2 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.62■■□□□ 1.05
Gm28043E0CXC2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28043E0CXC2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28043E0CXC2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28043E0CXC2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28043E0CXC2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28043E0CXC2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28043E0CXC2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28043E0CXC2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm28043E0CXC2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Gm28043E0CXC2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Gm28043E0CXC2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm28043E0CXC2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm28043E0CXC2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.6■■□□□ 1.05
Gm28043E0CXC2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28043E0CXC2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28043E0CXC2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.6■■□□□ 1.05
Gm28043E0CXC2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28043E0CXC2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28043E0CXC2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28043E0CXC2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28043E0CXC2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.59■■□□□ 1.05
Gm28043E0CXC2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28043E0CXC2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28043E0CXC2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm28043E0CXC2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.58■■□□□ 1.05
Gm28043E0CXC2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Gm28043E0CXC2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Gm28043E0CXC2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.58■■□□□ 1.05
Gm28043E0CXC2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Gm28043E0CXC2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Gm28043E0CXC2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Gm28043E0CXC2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm28043E0CXC2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm28043E0CXC2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.04
Gm28043E0CXC2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Gm28043E0CXC2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm28043E0CXC2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm28043E0CXC2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm28043E0CXC2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm28043E0CXC2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Gm28043E0CXC2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Gm28043E0CXC2 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.57■■□□□ 1.04
Gm28043E0CXC2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm28043E0CXC2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Gm28043E0CXC2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm28043E0CXC2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm28043E0CXC2 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.55■■□□□ 1.04
Gm28043E0CXC2 Scarna2-201ENSMUST00000157560 414 ntBASIC21.55■■□□□ 1.04
Gm28043E0CXC2 Gm9806-201ENSMUST00000051080 552 ntBASIC21.55■■□□□ 1.04
Gm28043E0CXC2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Gm28043E0CXC2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm28043E0CXC2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm28043E0CXC2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm28043E0CXC2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm28043E0CXC2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.54■■□□□ 1.04
Gm28043E0CXC2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Gm28043E0CXC2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm28043E0CXC2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Gm28043E0CXC2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Gm28043E0CXC2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Gm28043E0CXC2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.53■■□□□ 1.04
Gm28043E0CXC2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm28043E0CXC2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Gm28043E0CXC2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Gm28043E0CXC2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Gm28043E0CXC2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm28043E0CXC2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
Gm28043E0CXC2 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.52■■□□□ 1.04
Gm28043E0CXC2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Gm28043E0CXC2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.52■■□□□ 1.04
Gm28043E0CXC2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Gm28043E0CXC2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Gm28043E0CXC2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm28043E0CXC2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Gm28043E0CXC2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm28043E0CXC2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Gm28043E0CXC2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm28043E0CXC2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm28043E0CXC2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Gm28043E0CXC2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm28043E0CXC2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm28043E0CXC2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.5■■□□□ 1.03
Gm28043E0CXC2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm28043E0CXC2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm28043E0CXC2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms