Protein–RNA interactions for Protein: B8JJN0

Gm20547, Predicted gene 20547, mousemouse

Predictions only

Length 1,276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20547B8JJN0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm20547B8JJN0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm20547B8JJN0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm20547B8JJN0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm20547B8JJN0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Gm20547B8JJN0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm20547B8JJN0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm20547B8JJN0 Gm22567-201ENSMUST00000175542 342 ntBASIC20.82■□□□□ 0.92
Gm20547B8JJN0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.82■□□□□ 0.92
Gm20547B8JJN0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm20547B8JJN0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm20547B8JJN0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm20547B8JJN0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.81■□□□□ 0.92
Gm20547B8JJN0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm20547B8JJN0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm20547B8JJN0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm20547B8JJN0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Gm20547B8JJN0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Gm20547B8JJN0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm20547B8JJN0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm20547B8JJN0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm20547B8JJN0 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.8■□□□□ 0.92
Gm20547B8JJN0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm20547B8JJN0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm20547B8JJN0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.79■□□□□ 0.92
Gm20547B8JJN0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm20547B8JJN0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm20547B8JJN0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm20547B8JJN0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Gm20547B8JJN0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm20547B8JJN0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.77■□□□□ 0.92
Gm20547B8JJN0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm20547B8JJN0 Gm15546-201ENSMUST00000122095 826 ntBASIC20.77■□□□□ 0.92
Gm20547B8JJN0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.77■□□□□ 0.92
Gm20547B8JJN0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Gm20547B8JJN0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm20547B8JJN0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm20547B8JJN0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm20547B8JJN0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Gm20547B8JJN0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Gm20547B8JJN0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gm20547B8JJN0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm20547B8JJN0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Gm20547B8JJN0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Gm20547B8JJN0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm20547B8JJN0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm20547B8JJN0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Gm20547B8JJN0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.75■□□□□ 0.91
Gm20547B8JJN0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.75■□□□□ 0.91
Gm20547B8JJN0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gm20547B8JJN0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Gm20547B8JJN0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm20547B8JJN0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Gm20547B8JJN0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm20547B8JJN0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.74■□□□□ 0.91
Gm20547B8JJN0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm20547B8JJN0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm20547B8JJN0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm20547B8JJN0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.74■□□□□ 0.91
Gm20547B8JJN0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Gm20547B8JJN0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Gm20547B8JJN0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Gm20547B8JJN0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm20547B8JJN0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Gm20547B8JJN0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Gm20547B8JJN0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm20547B8JJN0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Gm20547B8JJN0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm20547B8JJN0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm20547B8JJN0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm20547B8JJN0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm20547B8JJN0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm20547B8JJN0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm20547B8JJN0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Gm20547B8JJN0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm20547B8JJN0 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.71■□□□□ 0.91
Gm20547B8JJN0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm20547B8JJN0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm20547B8JJN0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Gm20547B8JJN0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Gm20547B8JJN0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm20547B8JJN0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm20547B8JJN0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm20547B8JJN0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm20547B8JJN0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm20547B8JJN0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm20547B8JJN0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms