Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv1-88A0A140T8N1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv1-88A0A140T8N1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv1-88A0A140T8N1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv1-88A0A140T8N1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC14.28□□□□□ -0.12
Igkv1-88A0A140T8N1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv1-88A0A140T8N1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv1-88A0A140T8N1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv1-88A0A140T8N1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv1-88A0A140T8N1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv1-88A0A140T8N1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv1-88A0A140T8N1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv1-88A0A140T8N1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv1-88A0A140T8N1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Igkv1-88A0A140T8N1 Gm6934-201ENSMUST00000194780 1905 ntBASIC14.27□□□□□ -0.12
Igkv1-88A0A140T8N1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.27□□□□□ -0.12
Igkv1-88A0A140T8N1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC14.27□□□□□ -0.12
Igkv1-88A0A140T8N1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Igkv1-88A0A140T8N1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Igkv1-88A0A140T8N1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Igkv1-88A0A140T8N1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Igkv1-88A0A140T8N1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC14.27□□□□□ -0.13
Igkv1-88A0A140T8N1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv1-88A0A140T8N1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Igkv1-88A0A140T8N1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv1-88A0A140T8N1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv1-88A0A140T8N1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv1-88A0A140T8N1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv1-88A0A140T8N1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv1-88A0A140T8N1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv1-88A0A140T8N1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv1-88A0A140T8N1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv1-88A0A140T8N1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv1-88A0A140T8N1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Igkv1-88A0A140T8N1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv1-88A0A140T8N1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv1-88A0A140T8N1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv1-88A0A140T8N1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Igkv1-88A0A140T8N1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv1-88A0A140T8N1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Igkv1-88A0A140T8N1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv1-88A0A140T8N1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv1-88A0A140T8N1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.23□□□□□ -0.13
Igkv1-88A0A140T8N1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv1-88A0A140T8N1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Igkv1-88A0A140T8N1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv1-88A0A140T8N1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.22□□□□□ -0.13
Igkv1-88A0A140T8N1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv1-88A0A140T8N1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv1-88A0A140T8N1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv1-88A0A140T8N1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv1-88A0A140T8N1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv1-88A0A140T8N1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv1-88A0A140T8N1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv1-88A0A140T8N1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv1-88A0A140T8N1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Igkv1-88A0A140T8N1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Igkv1-88A0A140T8N1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv1-88A0A140T8N1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.21□□□□□ -0.13
Igkv1-88A0A140T8N1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv1-88A0A140T8N1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv1-88A0A140T8N1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Igkv1-88A0A140T8N1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Igkv1-88A0A140T8N1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv1-88A0A140T8N1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Igkv1-88A0A140T8N1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv1-88A0A140T8N1 Gm4799-201ENSMUST00000095396 657 ntBASIC14.2□□□□□ -0.14
Igkv1-88A0A140T8N1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv1-88A0A140T8N1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv1-88A0A140T8N1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv1-88A0A140T8N1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv1-88A0A140T8N1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC14.2□□□□□ -0.14
Igkv1-88A0A140T8N1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv1-88A0A140T8N1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv1-88A0A140T8N1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Igkv1-88A0A140T8N1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv1-88A0A140T8N1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv1-88A0A140T8N1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.19□□□□□ -0.14
Igkv1-88A0A140T8N1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv1-88A0A140T8N1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv1-88A0A140T8N1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.18□□□□□ -0.14
Igkv1-88A0A140T8N1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 1622.8 ms