Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.24■□□□□ 0.19
Trav19A0A0B4J1K4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav19A0A0B4J1K4 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.24■□□□□ 0.19
Trav19A0A0B4J1K4 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.23■□□□□ 0.19
Trav19A0A0B4J1K4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav19A0A0B4J1K4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav19A0A0B4J1K4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav19A0A0B4J1K4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav19A0A0B4J1K4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav19A0A0B4J1K4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav19A0A0B4J1K4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.22■□□□□ 0.19
Trav19A0A0B4J1K4 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.22■□□□□ 0.19
Trav19A0A0B4J1K4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav19A0A0B4J1K4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav19A0A0B4J1K4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav19A0A0B4J1K4 Gm22567-201ENSMUST00000175542 342 ntBASIC16.21■□□□□ 0.19
Trav19A0A0B4J1K4 Gm4799-201ENSMUST00000095396 657 ntBASIC16.21■□□□□ 0.19
Trav19A0A0B4J1K4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav19A0A0B4J1K4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav19A0A0B4J1K4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav19A0A0B4J1K4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav19A0A0B4J1K4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav19A0A0B4J1K4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav19A0A0B4J1K4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav19A0A0B4J1K4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav19A0A0B4J1K4 Gm6821-201ENSMUST00000107540 542 ntBASIC16.2■□□□□ 0.18
Trav19A0A0B4J1K4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav19A0A0B4J1K4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav19A0A0B4J1K4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Trav19A0A0B4J1K4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav19A0A0B4J1K4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav19A0A0B4J1K4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav19A0A0B4J1K4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav19A0A0B4J1K4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trav19A0A0B4J1K4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav19A0A0B4J1K4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav19A0A0B4J1K4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.19■□□□□ 0.18
Trav19A0A0B4J1K4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav19A0A0B4J1K4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav19A0A0B4J1K4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Trav19A0A0B4J1K4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav19A0A0B4J1K4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav19A0A0B4J1K4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav19A0A0B4J1K4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav19A0A0B4J1K4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav19A0A0B4J1K4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav19A0A0B4J1K4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav19A0A0B4J1K4 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.18■□□□□ 0.18
Trav19A0A0B4J1K4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav19A0A0B4J1K4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav19A0A0B4J1K4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav19A0A0B4J1K4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav19A0A0B4J1K4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav19A0A0B4J1K4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav19A0A0B4J1K4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav19A0A0B4J1K4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav19A0A0B4J1K4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav19A0A0B4J1K4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav19A0A0B4J1K4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav19A0A0B4J1K4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav19A0A0B4J1K4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav19A0A0B4J1K4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav19A0A0B4J1K4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav19A0A0B4J1K4 Gm9812-201ENSMUST00000061934 968 ntBASIC16.16■□□□□ 0.18
Trav19A0A0B4J1K4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav19A0A0B4J1K4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav19A0A0B4J1K4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav19A0A0B4J1K4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav19A0A0B4J1K4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav19A0A0B4J1K4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav19A0A0B4J1K4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav19A0A0B4J1K4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav19A0A0B4J1K4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav19A0A0B4J1K4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav19A0A0B4J1K4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav19A0A0B4J1K4 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.15■□□□□ 0.18
Trav19A0A0B4J1K4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav19A0A0B4J1K4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav19A0A0B4J1K4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav19A0A0B4J1K4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav19A0A0B4J1K4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav19A0A0B4J1K4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trav19A0A0B4J1K4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav19A0A0B4J1K4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.14■□□□□ 0.17
Trav19A0A0B4J1K4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
Trav19A0A0B4J1K4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav19A0A0B4J1K4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav19A0A0B4J1K4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav19A0A0B4J1K4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav19A0A0B4J1K4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav19A0A0B4J1K4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav19A0A0B4J1K4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav19A0A0B4J1K4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav19A0A0B4J1K4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav19A0A0B4J1K4 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.13■□□□□ 0.17
Trav19A0A0B4J1K4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav19A0A0B4J1K4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav19A0A0B4J1K4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav19A0A0B4J1K4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav19A0A0B4J1K4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms