Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav11A0A0B4J1J9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav11A0A0B4J1J9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav11A0A0B4J1J9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav11A0A0B4J1J9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav11A0A0B4J1J9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav11A0A0B4J1J9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav11A0A0B4J1J9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav11A0A0B4J1J9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav11A0A0B4J1J9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav11A0A0B4J1J9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav11A0A0B4J1J9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav11A0A0B4J1J9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Trav11A0A0B4J1J9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav11A0A0B4J1J9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav11A0A0B4J1J9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trav11A0A0B4J1J9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav11A0A0B4J1J9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav11A0A0B4J1J9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav11A0A0B4J1J9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav11A0A0B4J1J9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Trav11A0A0B4J1J9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav11A0A0B4J1J9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav11A0A0B4J1J9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav11A0A0B4J1J9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav11A0A0B4J1J9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav11A0A0B4J1J9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav11A0A0B4J1J9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav11A0A0B4J1J9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav11A0A0B4J1J9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav11A0A0B4J1J9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav11A0A0B4J1J9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav11A0A0B4J1J9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav11A0A0B4J1J9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav11A0A0B4J1J9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav11A0A0B4J1J9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav11A0A0B4J1J9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav11A0A0B4J1J9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav11A0A0B4J1J9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trav11A0A0B4J1J9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav11A0A0B4J1J9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav11A0A0B4J1J9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav11A0A0B4J1J9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav11A0A0B4J1J9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav11A0A0B4J1J9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trav11A0A0B4J1J9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav11A0A0B4J1J9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav11A0A0B4J1J9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav11A0A0B4J1J9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav11A0A0B4J1J9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav11A0A0B4J1J9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav11A0A0B4J1J9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav11A0A0B4J1J9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav11A0A0B4J1J9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Trav11A0A0B4J1J9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav11A0A0B4J1J9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav11A0A0B4J1J9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav11A0A0B4J1J9 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.81□□□□□ -0.04
Trav11A0A0B4J1J9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav11A0A0B4J1J9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav11A0A0B4J1J9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav11A0A0B4J1J9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav11A0A0B4J1J9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav11A0A0B4J1J9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav11A0A0B4J1J9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav11A0A0B4J1J9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav11A0A0B4J1J9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav11A0A0B4J1J9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav11A0A0B4J1J9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav11A0A0B4J1J9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav11A0A0B4J1J9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav11A0A0B4J1J9 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.8□□□□□ -0.04
Trav11A0A0B4J1J9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
Trav11A0A0B4J1J9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav11A0A0B4J1J9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav11A0A0B4J1J9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav11A0A0B4J1J9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav11A0A0B4J1J9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav11A0A0B4J1J9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav11A0A0B4J1J9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav11A0A0B4J1J9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav11A0A0B4J1J9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav11A0A0B4J1J9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav11A0A0B4J1J9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav11A0A0B4J1J9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav11A0A0B4J1J9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav11A0A0B4J1J9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav11A0A0B4J1J9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav11A0A0B4J1J9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav11A0A0B4J1J9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav11A0A0B4J1J9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav11A0A0B4J1J9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav11A0A0B4J1J9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav11A0A0B4J1J9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav11A0A0B4J1J9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav11A0A0B4J1J9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav11A0A0B4J1J9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav11A0A0B4J1J9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav11A0A0B4J1J9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav11A0A0B4J1J9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms