Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv4-50A0A0B4J1J0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv4-50A0A0B4J1J0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.29■□□□□ 0.52
Igkv4-50A0A0B4J1J0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv4-50A0A0B4J1J0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Igkv4-50A0A0B4J1J0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv4-50A0A0B4J1J0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv4-50A0A0B4J1J0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.28■□□□□ 0.52
Igkv4-50A0A0B4J1J0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.28■□□□□ 0.52
Igkv4-50A0A0B4J1J0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv4-50A0A0B4J1J0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-50A0A0B4J1J0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-50A0A0B4J1J0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-50A0A0B4J1J0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Igkv4-50A0A0B4J1J0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.27■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv4-50A0A0B4J1J0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Igkv4-50A0A0B4J1J0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.26■□□□□ 0.51
Igkv4-50A0A0B4J1J0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.26■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.26■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-50A0A0B4J1J0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.25■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.25■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-50A0A0B4J1J0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.24■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Gm11175-201ENSMUST00000116172 543 ntBASIC18.24■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.24■□□□□ 0.51
Igkv4-50A0A0B4J1J0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.23■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.22■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Igkv4-50A0A0B4J1J0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.22■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-50A0A0B4J1J0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.22■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Igkv4-50A0A0B4J1J0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv4-50A0A0B4J1J0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.21■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Gm27502-201ENSMUST00000183495 199 ntBASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv4-50A0A0B4J1J0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms