Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv19A0A0B4J1H4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv19A0A0B4J1H4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv19A0A0B4J1H4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trbv19A0A0B4J1H4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv19A0A0B4J1H4 Gm44428-201ENSMUST00000204474 874 ntBASIC17.44■□□□□ 0.38
Trbv19A0A0B4J1H4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv19A0A0B4J1H4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv19A0A0B4J1H4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv19A0A0B4J1H4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.43■□□□□ 0.38
Trbv19A0A0B4J1H4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv19A0A0B4J1H4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv19A0A0B4J1H4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.43■□□□□ 0.38
Trbv19A0A0B4J1H4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.43■□□□□ 0.38
Trbv19A0A0B4J1H4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trbv19A0A0B4J1H4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv19A0A0B4J1H4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.43■□□□□ 0.38
Trbv19A0A0B4J1H4 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.43■□□□□ 0.38
Trbv19A0A0B4J1H4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv19A0A0B4J1H4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv19A0A0B4J1H4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv19A0A0B4J1H4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv19A0A0B4J1H4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv19A0A0B4J1H4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Trbv19A0A0B4J1H4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv19A0A0B4J1H4 Scarna2-201ENSMUST00000157560 414 ntBASIC17.41■□□□□ 0.38
Trbv19A0A0B4J1H4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv19A0A0B4J1H4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv19A0A0B4J1H4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv19A0A0B4J1H4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trbv19A0A0B4J1H4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv19A0A0B4J1H4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.4■□□□□ 0.38
Trbv19A0A0B4J1H4 Gm9806-201ENSMUST00000051080 552 ntBASIC17.4■□□□□ 0.38
Trbv19A0A0B4J1H4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv19A0A0B4J1H4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv19A0A0B4J1H4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv19A0A0B4J1H4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv19A0A0B4J1H4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv19A0A0B4J1H4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv19A0A0B4J1H4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv19A0A0B4J1H4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.39■□□□□ 0.37
Trbv19A0A0B4J1H4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv19A0A0B4J1H4 Gm16437-201ENSMUST00000025669 507 ntBASIC17.38■□□□□ 0.37
Trbv19A0A0B4J1H4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv19A0A0B4J1H4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv19A0A0B4J1H4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv19A0A0B4J1H4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trbv19A0A0B4J1H4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv19A0A0B4J1H4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv19A0A0B4J1H4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trbv19A0A0B4J1H4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv19A0A0B4J1H4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.37■□□□□ 0.37
Trbv19A0A0B4J1H4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.37■□□□□ 0.37
Trbv19A0A0B4J1H4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trbv19A0A0B4J1H4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv19A0A0B4J1H4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv19A0A0B4J1H4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.36■□□□□ 0.37
Trbv19A0A0B4J1H4 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.36■□□□□ 0.37
Trbv19A0A0B4J1H4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.36■□□□□ 0.37
Trbv19A0A0B4J1H4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv19A0A0B4J1H4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.36■□□□□ 0.37
Trbv19A0A0B4J1H4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv19A0A0B4J1H4 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.35■□□□□ 0.37
Trbv19A0A0B4J1H4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv19A0A0B4J1H4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv19A0A0B4J1H4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trbv19A0A0B4J1H4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv19A0A0B4J1H4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.35■□□□□ 0.37
Trbv19A0A0B4J1H4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv19A0A0B4J1H4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trbv19A0A0B4J1H4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trbv19A0A0B4J1H4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv19A0A0B4J1H4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv19A0A0B4J1H4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv19A0A0B4J1H4 Gm11687-201ENSMUST00000118911 886 ntBASIC17.34■□□□□ 0.37
Trbv19A0A0B4J1H4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.34■□□□□ 0.37
Trbv19A0A0B4J1H4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv19A0A0B4J1H4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv19A0A0B4J1H4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv19A0A0B4J1H4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv19A0A0B4J1H4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trbv19A0A0B4J1H4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.33■□□□□ 0.37
Trbv19A0A0B4J1H4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.33■□□□□ 0.37
Trbv19A0A0B4J1H4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.33■□□□□ 0.37
Trbv19A0A0B4J1H4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv19A0A0B4J1H4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv19A0A0B4J1H4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv19A0A0B4J1H4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv19A0A0B4J1H4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv19A0A0B4J1H4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.33■□□□□ 0.36
Trbv19A0A0B4J1H4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv19A0A0B4J1H4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv19A0A0B4J1H4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv19A0A0B4J1H4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv19A0A0B4J1H4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms