Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.91□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Gm4799-201ENSMUST00000095396 657 ntBASIC14.91□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.89□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.87□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.85□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.85□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.85□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.84□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.84□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13-4-dv7A0A075B6C2 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.83□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.82□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-4-dv7A0A075B6C2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms