Protein–RNA interactions for Protein: A0A075B6C1

Trav7-4, T cell receptor alpha variable 7-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-4A0A075B6C1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7-4A0A075B6C1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav7-4A0A075B6C1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7-4A0A075B6C1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav7-4A0A075B6C1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav7-4A0A075B6C1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Trav7-4A0A075B6C1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7-4A0A075B6C1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7-4A0A075B6C1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7-4A0A075B6C1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-4A0A075B6C1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-4A0A075B6C1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-4A0A075B6C1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav7-4A0A075B6C1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-4A0A075B6C1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-4A0A075B6C1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.59■□□□□ 0.25
Trav7-4A0A075B6C1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav7-4A0A075B6C1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trav7-4A0A075B6C1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-4A0A075B6C1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.58■□□□□ 0.24
Trav7-4A0A075B6C1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-4A0A075B6C1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-4A0A075B6C1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-4A0A075B6C1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-4A0A075B6C1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-4A0A075B6C1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-4A0A075B6C1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-4A0A075B6C1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav7-4A0A075B6C1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-4A0A075B6C1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Trav7-4A0A075B6C1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-4A0A075B6C1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-4A0A075B6C1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-4A0A075B6C1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-4A0A075B6C1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav7-4A0A075B6C1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC16.56■□□□□ 0.24
Trav7-4A0A075B6C1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav7-4A0A075B6C1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-4A0A075B6C1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-4A0A075B6C1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav7-4A0A075B6C1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav7-4A0A075B6C1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav7-4A0A075B6C1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-4A0A075B6C1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.55■□□□□ 0.24
Trav7-4A0A075B6C1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-4A0A075B6C1 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.55■□□□□ 0.24
Trav7-4A0A075B6C1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav7-4A0A075B6C1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav7-4A0A075B6C1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-4A0A075B6C1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-4A0A075B6C1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trav7-4A0A075B6C1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav7-4A0A075B6C1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-4A0A075B6C1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-4A0A075B6C1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav7-4A0A075B6C1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.54■□□□□ 0.24
Trav7-4A0A075B6C1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.53■□□□□ 0.24
Trav7-4A0A075B6C1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-4A0A075B6C1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-4A0A075B6C1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-4A0A075B6C1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-4A0A075B6C1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-4A0A075B6C1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-4A0A075B6C1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-4A0A075B6C1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-4A0A075B6C1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-4A0A075B6C1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav7-4A0A075B6C1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav7-4A0A075B6C1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-4A0A075B6C1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7-4A0A075B6C1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7-4A0A075B6C1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-4A0A075B6C1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-4A0A075B6C1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-4A0A075B6C1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-4A0A075B6C1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-4A0A075B6C1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-4A0A075B6C1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-4A0A075B6C1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav7-4A0A075B6C1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.5■□□□□ 0.23
Trav7-4A0A075B6C1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-4A0A075B6C1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav7-4A0A075B6C1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-4A0A075B6C1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-4A0A075B6C1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav7-4A0A075B6C1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-4A0A075B6C1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.5■□□□□ 0.23
Trav7-4A0A075B6C1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-4A0A075B6C1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-4A0A075B6C1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-4A0A075B6C1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-4A0A075B6C1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-4A0A075B6C1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-4A0A075B6C1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav7-4A0A075B6C1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-4A0A075B6C1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-4A0A075B6C1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-4A0A075B6C1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav7-4A0A075B6C1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-4A0A075B6C1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms