Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Gm9812-201ENSMUST00000061934 968 ntBASIC18.48■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.47■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.47■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trav15d-1-dv6d-1A0A075B624 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.45■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.44■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.43■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.42■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.41■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Mir3960-201ENSMUST00000198213 73 ntBASIC18.4■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.4■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav15d-1-dv6d-1A0A075B624 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Gm8503-201ENSMUST00000118131 455 ntBASIC18.39■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.39■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.39■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.38■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.38■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Terc-201ENSMUST00000082862 423 ntBASIC18.38■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.38■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.38■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.37■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms