Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcb1Q9Z0H3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Gm15371-201ENSMUST00000117057 784 ntBASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Gm15678-201ENSMUST00000117573 960 ntBASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Gm17794-201ENSMUST00000220252 955 ntBASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcb1Q9Z0H3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Gm12485-201ENSMUST00000119641 291 ntBASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Gm44719-201ENSMUST00000206404 149 ntBASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.46□□□□□ -0.09
Smarcb1Q9Z0H3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcb1Q9Z0H3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Smarcb1Q9Z0H3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.46□□□□□ -0.1
Smarcb1Q9Z0H3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcb1Q9Z0H3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcb1Q9Z0H3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms