Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn8aQ9WTU3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Gm11803-201ENSMUST00000119966 444 ntBASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Gm6152-201ENSMUST00000151704 340 ntBASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Gm43438-201ENSMUST00000198133 379 ntBASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scn8aQ9WTU3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Gm15429-201ENSMUST00000151268 798 ntBASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn8aQ9WTU3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Gm24196-201ENSMUST00000179161 110 ntBASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Scn8aQ9WTU3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms