Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.2□□□□□ -0.3
Trim3Q9R1R2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 AA543401-201ENSMUST00000164248 1269 ntBASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Auts2-212ENSMUST00000178555 309 ntBASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trim3Q9R1R2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Gm6415-201ENSMUST00000118488 348 ntBASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Gm14042-201ENSMUST00000120139 833 ntBASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim3Q9R1R2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Gm18766-201ENSMUST00000189811 808 ntBASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim3Q9R1R2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim3Q9R1R2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim3Q9R1R2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim3Q9R1R2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim3Q9R1R2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim3Q9R1R2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim3Q9R1R2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim3Q9R1R2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim3Q9R1R2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim3Q9R1R2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim3Q9R1R2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trim3Q9R1R2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms