Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Atp6ap1Q9R1Q9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Atp6ap1Q9R1Q9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Atp6ap1Q9R1Q9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Atp6ap1Q9R1Q9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Atp6ap1Q9R1Q9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Atp6ap1Q9R1Q9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Atp6ap1Q9R1Q9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Atp6ap1Q9R1Q9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Atp6ap1Q9R1Q9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.71□□□□□ -0.22
Atp6ap1Q9R1Q9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Atp6ap1Q9R1Q9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Atp6ap1Q9R1Q9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Atp6ap1Q9R1Q9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Atp6ap1Q9R1Q9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Gm15460-201ENSMUST00000118147 391 ntBASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Gm27680-201ENSMUST00000184192 160 ntBASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Gm37714-201ENSMUST00000194742 342 ntBASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.7□□□□□ -0.22
Atp6ap1Q9R1Q9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atp6ap1Q9R1Q9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atp6ap1Q9R1Q9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atp6ap1Q9R1Q9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms