Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubd1Q9R1K7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Gm17795-201ENSMUST00000214505 757 ntBASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubd1Q9R1K7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Gm9797-201ENSMUST00000052902 613 ntBASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubd1Q9R1K7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Tubd1Q9R1K7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Tubd1Q9R1K7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubd1Q9R1K7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms