Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Gm27631-201ENSMUST00000184163 466 ntBASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40aQ9R1C7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Gm15920-201ENSMUST00000118998 402 ntBASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Gm28630-201ENSMUST00000187806 498 ntBASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Gm25007-201ENSMUST00000083808 133 ntBASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40aQ9R1C7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Gm24543-201ENSMUST00000103867 82 ntBASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Gm27622-201ENSMUST00000183779 60 ntBASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.4■□□□□ 0.06
Prpf40aQ9R1C7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms