Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf4Q9QZS2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Gm45098-201ENSMUST00000207179 657 ntBASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.12□□□□□ -0.15
Rnf4Q9QZS2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gm12895-201ENSMUST00000122214 226 ntBASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gm28033-201ENSMUST00000184224 96 ntBASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms