Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chaf1aQ9QWF0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Gm11779-201ENSMUST00000118541 368 ntBASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chaf1aQ9QWF0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Gm17271-201ENSMUST00000165535 355 ntBASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Gm10275-202ENSMUST00000168697 495 ntBASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Gm10275-201ENSMUST00000092620 635 ntBASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chaf1aQ9QWF0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Gm14494-201ENSMUST00000118786 435 ntBASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms