Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sec61a2Q9JLR1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sec61a2Q9JLR1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a2Q9JLR1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm22065-201ENSMUST00000103753 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm22066-201ENSMUST00000103761 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm24932-201ENSMUST00000103763 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm24115-201ENSMUST00000103799 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm22190-201ENSMUST00000103827 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm22191-201ENSMUST00000103831 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm24721-201ENSMUST00000103849 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm28018-201ENSMUST00000103869 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm26399-201ENSMUST00000103937 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm13616-201ENSMUST00000120600 222 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm25349-201ENSMUST00000177728 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm23616-201ENSMUST00000177797 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm25871-201ENSMUST00000177816 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm24752-201ENSMUST00000178240 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm24496-201ENSMUST00000178287 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm25649-201ENSMUST00000178476 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm25548-201ENSMUST00000178681 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm23147-201ENSMUST00000178841 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm26095-201ENSMUST00000179270 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm22171-201ENSMUST00000179283 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm23936-201ENSMUST00000179354 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm22619-201ENSMUST00000179516 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm25255-201ENSMUST00000179579 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm24755-201ENSMUST00000179691 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm26506-201ENSMUST00000179692 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm25086-201ENSMUST00000179931 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm23243-201ENSMUST00000180047 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm24659-201ENSMUST00000180212 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm24169-201ENSMUST00000180244 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm23689-201ENSMUST00000180354 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm27359-201ENSMUST00000184153 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm27785-201ENSMUST00000184268 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm27466-201ENSMUST00000184396 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm27703-201ENSMUST00000184836 110 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm5779-201ENSMUST00000218467 910 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a2Q9JLR1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Mir449b-201ENSMUST00000104833 80 ntBASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Gm13015-201ENSMUST00000118674 204 ntBASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Gm7774-201ENSMUST00000200064 533 ntBASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms