Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Gm13369-201ENSMUST00000119442 987 ntBASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Gm27516-201ENSMUST00000184237 98 ntBASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cacna1fQ9JIS7 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.65■□□□□ 0.1
Cacna1fQ9JIS7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Gm11637-201ENSMUST00000120601 592 ntBASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1fQ9JIS7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cacna1fQ9JIS7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1fQ9JIS7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1fQ9JIS7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cacna1fQ9JIS7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1fQ9JIS7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1fQ9JIS7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Cacna1fQ9JIS7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cacna1fQ9JIS7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cacna1fQ9JIS7 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.63■□□□□ 0.09
Cacna1fQ9JIS7 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.63■□□□□ 0.09
Cacna1fQ9JIS7 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms