Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.18□□□□□ -0.62
Smco4Q9JIS3 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smco4Q9JIS3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Matn2-203ENSMUST00000226766 3252 ntBASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.17□□□□□ -0.62
Smco4Q9JIS3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms