Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Gm5161-201ENSMUST00000075243 853 ntBASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-4Q9EQM3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.27□□□□□ -0.12
Nkx2-4Q9EQM3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-4Q9EQM3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-4Q9EQM3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-4Q9EQM3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-4Q9EQM3 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.27□□□□□ -0.12
Nkx2-4Q9EQM3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Nkx2-4Q9EQM3 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.27□□□□□ -0.12
Nkx2-4Q9EQM3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nkx2-4Q9EQM3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-4Q9EQM3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Gm2383-201ENSMUST00000181461 807 ntBASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-4Q9EQM3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 BC037039-201ENSMUST00000192003 2205 ntBASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Gm12997-201ENSMUST00000120207 640 ntBASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Gm17376-201ENSMUST00000166016 84 ntBASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Gm2991-201ENSMUST00000173338 480 ntBASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-4Q9EQM3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Gm14381-201ENSMUST00000122105 414 ntBASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Gm25927-201ENSMUST00000175058 117 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms