Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Gm15321-201ENSMUST00000121290 288 ntBASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Gm16215-201ENSMUST00000161990 637 ntBASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Gm29667-201ENSMUST00000190817 490 ntBASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Gm7730-201ENSMUST00000212486 454 ntBASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssmem1Q9D9Y8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Gm8584-201ENSMUST00000171982 758 ntBASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Gm5866-201ENSMUST00000177881 973 ntBASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Gm10766-202ENSMUST00000194123 606 ntBASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssmem1Q9D9Y8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ssmem1Q9D9Y8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Gm9522-201ENSMUST00000182394 926 ntBASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ssmem1Q9D9Y8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms