Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
U2af1Q9D883 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
U2af1Q9D883 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
U2af1Q9D883 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
U2af1Q9D883 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1Q9D883 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
U2af1Q9D883 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1Q9D883 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
U2af1Q9D883 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC18.38■□□□□ 0.53
U2af1Q9D883 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.38■□□□□ 0.53
U2af1Q9D883 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1Q9D883 Gm6912-201ENSMUST00000117218 544 ntBASIC18.38■□□□□ 0.53
U2af1Q9D883 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC18.38■□□□□ 0.53
U2af1Q9D883 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC18.38■□□□□ 0.53
U2af1Q9D883 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.38■□□□□ 0.53
U2af1Q9D883 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
U2af1Q9D883 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.38■□□□□ 0.53
U2af1Q9D883 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1Q9D883 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.38■□□□□ 0.53
U2af1Q9D883 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1Q9D883 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
U2af1Q9D883 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1Q9D883 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC18.37■□□□□ 0.53
U2af1Q9D883 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
U2af1Q9D883 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
U2af1Q9D883 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
U2af1Q9D883 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.37■□□□□ 0.53
U2af1Q9D883 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.37■□□□□ 0.53
U2af1Q9D883 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
U2af1Q9D883 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.37■□□□□ 0.53
U2af1Q9D883 Gm29741-201ENSMUST00000192667 421 ntBASIC18.37■□□□□ 0.53
U2af1Q9D883 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC18.37■□□□□ 0.53
U2af1Q9D883 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
U2af1Q9D883 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
U2af1Q9D883 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Gm12020-201ENSMUST00000119030 2042 ntBASIC18.37■□□□□ 0.53
U2af1Q9D883 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
U2af1Q9D883 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
U2af1Q9D883 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
U2af1Q9D883 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
U2af1Q9D883 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC18.36■□□□□ 0.53
U2af1Q9D883 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
U2af1Q9D883 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
U2af1Q9D883 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.36■□□□□ 0.53
U2af1Q9D883 Gm28631-201ENSMUST00000190740 334 ntBASIC18.36■□□□□ 0.53
U2af1Q9D883 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
U2af1Q9D883 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
U2af1Q9D883 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC18.36■□□□□ 0.53
U2af1Q9D883 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.36■□□□□ 0.53
U2af1Q9D883 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
U2af1Q9D883 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
U2af1Q9D883 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC18.35■□□□□ 0.53
U2af1Q9D883 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC18.35■□□□□ 0.53
U2af1Q9D883 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC18.35■□□□□ 0.53
U2af1Q9D883 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
U2af1Q9D883 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
U2af1Q9D883 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms