Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nop56Q9D6Z1 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nop56Q9D6Z1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nop56Q9D6Z1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nop56Q9D6Z1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nop56Q9D6Z1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nop56Q9D6Z1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nop56Q9D6Z1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Nop56Q9D6Z1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nop56Q9D6Z1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nop56Q9D6Z1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Gm7862-201ENSMUST00000121461 292 ntBASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Gm2272-201ENSMUST00000194903 582 ntBASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nop56Q9D6Z1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nop56Q9D6Z1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.46□□□□□ -0.1
Nop56Q9D6Z1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nop56Q9D6Z1 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nop56Q9D6Z1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nop56Q9D6Z1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.46□□□□□ -0.1
Nop56Q9D6Z1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nop56Q9D6Z1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nop56Q9D6Z1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nop56Q9D6Z1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Gm24589-201ENSMUST00000116692 94 ntBASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Gm27300-201ENSMUST00000184085 97 ntBASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Gm27335-201ENSMUST00000184758 97 ntBASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms